Alosa sapidissima (American shad): 121719638
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Entry
121719638 CDS
T11137
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04310
Wnt signaling pathway
asad04520
Adherens junction
asad04916
Melanogenesis
asad05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121719638 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121719638 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121719638 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121719638 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121719638 (lef1)
Transcription factors [BR:
asad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
121719638 (lef1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121719638
NCBI-ProteinID:
XP_041961373
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All DBs
Position
1:24154880..24193128
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AA seq
380 aa
AA seq
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MPQLAGGGGGGDPELCATDEMIPFKDEGDPQKEQIFAEINHSEEEGDLAEIKSSLVNETE
ISPNSNSHDTGRQSQIPQDSYHEKHRDLSDDGKHQDMYNKGHPYSGYPGYIMMNMNNDSY
MNNGSLSPPMARTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHSGHHPQDMNIKQGMQ
RHHHGQDIPNFYPLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQVKHEPH
HDTDLMHMKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILG
RRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKMQEQATGGKRNA
FSTCKAKAAATGPLLEMEAC
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgccacagttagccggtggaggaggcggcggggacccggagctctgcgccaccgacgaa
atgattcccttcaaagacgaaggagacccacagaaagaacagatattcgcagagattaac
cactcggaagaagaaggggacttggcagaaatcaagtcctctttagtcaatgagacggag
ataagcccaaacagcaacagtcatgatacaggtagacagtcccagataccccaagactca
taccatgaaaagcacagagatctttcagatgatggcaagcatcaagacatgtacaacaaa
gggcacccatattctggctatccaggctacatcatgatgaacatgaacaatgactcgtac
atgaacaacggctcactctcaccacccatggccagaacgtcaaacaaggtgccagtggtg
cagccatcccacgcagtccatcccctcacccccctcatcacgtacagcgatgagcacttc
gctccgggaccccactctggacaccatccccaggacatgaacatcaagcaaggtatgcag
aggcatcatcatggtcaagacattcccaacttctatcccttgtccccaggaggagttgga
cagatcactccaccactgggatggttttcccaccacatggtcccaggtccgcccggcccc
catgccacaggcatcccgcaccctgctatcgtaaacccccaggtcaaacatgagccccat
cacgacaccgatctgatgcacatgaaacctcagcacgaacagagaaaagagcaagagccc
aaaagacctcacatcaagaaacctctaaacgctttcatgctgtatatgaaagagatgcgg
gccaacgtggtggccgagtgtacgctgaaggagagcgccgccatcaaccagatcctgggg
aggcggtggcatgctttatctcgggaagagcaagctaagtattacgaattagcccgcaag
gaacgccagctccacatgcagctctaccctggctggtccgctcgagacaattatggaaag
aagaagaagaggaagcgggagaagatgcaggaacaggccacaggagggaagcggaatgcg
ttctctacatgtaaggcgaaggctgcagctacaggcccccttttagagatggaggcctgc
taa
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