Alosa sapidissima (American shad): 121719912
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Entry
121719912 CDS
T11137
Symbol
abcb4
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121719912 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asad02000
]
121719912 (abcb4)
04147 Exosome [BR:
asad04147
]
121719912 (abcb4)
04090 CD molecules [BR:
asad04090
]
121719912 (abcb4)
Enzymes [BR:
asad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121719912 (abcb4)
Transporters [BR:
asad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121719912 (abcb4)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121719912 (abcb4)
CD molecules [BR:
asad04090
]
Proteins
121719912 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Zeta_toxin
AAA_16
Rad17
RsgA_GTPase
AAA_28
G-alpha
AAA_15
AAA
AAA_29
PRK
AAA_30
AAA_7
AAA_24
DUF815
Motif
Other DBs
NCBI-GeneID:
121719912
NCBI-ProteinID:
XP_041961594
LinkDB
All DBs
Position
10:complement(34596419..34624332)
Genome browser
AA seq
1277 aa
AA seq
DB search
MGKDSEEYKLKGNVKGDQNGDIGSEKKEEKPEKMEMVGSFEIFRFANGVDVLLMISATIM
AMVNGAILPLMVIVFGDMTDSFVGDALSNITNITGDPDLALPPGETLGEQMTRHAIYYSI
MGGAVLIAAYMQVAFWTLAAGRQVKRLRKKFFHAIIQQEIGWFDINETGQLNTRLADDIL
KINEGIGDKLGMLIQSLTTFITGFVIGFVKGWKLTLVILSISPLLGIAAGLIAKVMTTFT
SKEQTAYAKAGAVAEEVLSAVRTVYAFGGQKKEIERYNNNLVDAKNLGVKKAITVNMAVG
FTYSLMYMSYALAFWYGSTLIIAEEYTIGSVLTVFFAVIIGAFSIGQTSPNIQAFSSARG
AAYKVYQIIDNKPNINSYSNAGHKPDHIKGNIEFKNIHFTYPSRTDVKVLNNMSLKVSSG
QTMALVGSSGCGKSTTVQLLQRFYDPQEGSVSIDGHDIRSLNVRYLRSLIGVVSQEPVLF
ATSIAENIRYGREDVTQEEIEQATREANAYDFIMKLPDKFETLVGDRGTQMSGGQKQRIA
IARALVRNPKILLLDEATSALDAESEKIVQAALDKVRQGRTTIVVAHRLSTIRNADVIAG
VHKGQIVEQGTHAELMDKQGVYHTLVTMQTFKSVEGSDEQEVEVKDGKSPSVSSMTENSL
FRQKSKSGSFVQSDKDPQADDKETEQAEEKVPEMSFFQILKWNSPEWPYMVVGVCCAIIN
GGIQPAFAIIFSKIIAVFAEPDTAIVRQKADLYSLLFAAIGVVSFITLFLQGFCFGKAGE
ILTMRLRLSAFKAMMRQDLGWYDDSKNSVGALTTRLATDAAQVQGATGLRLATLAQNVAN
LGTSIIISFVYGWQLTLLILTVVPIMAIAGAVQMQMLGGHATKDKKELEKAGKIATEAIE
NIRTVVSLTREETFEAHYQENLIVPYKNSVKKAHVFGFTFSFSQAMIYFAYAGCFRFGAW
LIEQNQMTFEDVFLVISAVIYGAMAVGEANSFTPNYAKAKMSASHIKMLVDKVPAIDNSS
EEGEQPDKFEGNVNFENVHFHYPSRPDVTVLKGLRLRARKGQTIALVGSSGCGKSTTIQL
LERFYDPTHGSVKLDKNDSRQLNIHWLRAQMGIVSQEPILFDCSLAENIAYGDNSREVTQ
EEIEQAAKAANIHSFIEGLPQKYQTQAGDKGTQLSGGQKQRIAIARAILRNPKLLLLDEA
TSALDTESEQIVQEALDKAREGRTCIVVAHRLSTVQNADVIAVFQNGVVVEQGTHQQLLS
KQGVYYTLVTSQMGQQH
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagattccgaagaatacaaactcaaggggaacgtaaaaggggaccaaaatgga
gacataggaagtgagaaaaaagaagagaagccagagaagatggagatggttggctccttc
gagatattccgtttcgccaacggagtggacgtgctgttgatgatttcggccactataatg
gcgatggtgaatggagctatccttcctctcatggtgatcgtgtttggggacatgacagac
agctttgtgggtgacgcattgtcaaacataacaaacatcactggtgaccctgatttagca
cttccaccgggggagactttaggggaacagatgaccaggcatgcaatatactacagcatc
atgggaggtgcagttcttatagccgcatacatgcaagtggctttctggacattggcagct
ggtcgacaggtgaagagactacgaaagaagttcttccatgccatcattcagcaggagatt
ggctggtttgacatcaacgagacaggccagctcaacacacgccttgccgatgacatcttg
aagatcaacgagggcatcggcgacaaactgggcatgctcatccagtcgctcaccaccttc
atcacgggcttcgtcatcggcttcgtcaaaggctggaagctcaccctcgtcatcctctcc
atcagcccgctcctcggaatagcggccggcctcatcgcaaaggtgatgacaacgttcacc
tctaaagagcaaacagcctatgcgaaggcaggagctgtagcagaggaggtcctgtcggca
gtcaggacggtttatgctttcggaggacaaaagaaagagatcgagagatacaacaacaac
ctggtggatgctaagaacctcggggtgaagaaagccatcacggtgaacatggctgtgggc
ttcacctactccttaatgtacatgtcctacgctctggccttctggtacggcagcacactc
atcatcgctgaggaatacaccatcggatcagtgctgacggttttctttgcggtcattatc
ggtgctttcagtattggccaaacgtcccccaacatccaggccttctcctctgcgcgtggg
gcagcctataaagtgtaccagatcatcgacaataaacccaacatcaacagctactcaaac
gcgggtcacaagccagaccatatcaaaggcaacattgagtttaagaacatccacttcacc
tacccgtcacgaacggatgtcaaagtgctcaacaacatgagcctgaaggtcagcagtggt
cagacgatggccctggtgggcagcagtggctgtggcaagagcaccacagtgcagctgctg
cagcgcttctatgaccctcaggaaggatcggtgagcatcgatggccatgacatccgttca
ctgaatgttcgctacttacgtagcctgataggcgtggtgagccaggaacccgtgctgttt
gccacctctatcgctgaaaacatccgctatggacgagaggacgtcacgcaagaagagatc
gagcaggccacccgcgaggctaacgcctacgatttcatcatgaaactgcctgataaattt
gagacgctggtcggagatcgaggcactcagatgagtggcggccagaagcagaggattgcc
atcgctcgagcgctcgtgcgcaatcccaagatcctcctgctggacgaggcgacgtcggcc
cttgatgctgagagcgaaaaaatcgtacaggctgcactggacaaagtaagacaaggccgc
accaccattgtggtggctcaccgtctctccaccatccgtaacgctgatgtgatcgccggg
gtccacaaggggcagattgtggagcagggcactcacgcggagctgatggacaagcaagga
gtttaccacacgctggtgaccatgcagactttcaagagtgttgaggggtccgatgagcag
gaggtggaggtgaaggacggcaagagtccctccgtcagctccatgactgagaactccctc
ttcaggcagaagtccaaatccggctccttcgtccagtcagacaaagacccacaggccgac
gacaaggaaaccgagcaggcggaggagaaagtgccagagatgagcttcttccagatactg
aagtggaattctccggaatggccatacatggtagtgggggtctgctgtgccatcatcaac
ggaggcatacagcctgcctttgccatcatcttctccaaaatcattgctgtgtttgctgag
cctgacacagcgattgtgagacagaaggcagatctctactctctgctgtttgctgccatt
ggagttgtgtcgttcatcacactgtttctgcagggattctgctttggtaaagctggagag
atcctcaccatgagattgagactgagtgccttcaaagccatgatgagacaggatttgggc
tggtatgatgactcgaaaaacagcgtgggtgctttgaccaccaggctggcaacagatgcg
gctcaagtccagggtgctacagggctgcgcctagcaacgctggctcagaacgtcgccaac
ctgggcacctccatcatcatctccttcgtctacggctggcagctcaccctcctcatcctc
actgtagtgcccatcatggctattgctggggcggtccagatgcagatgctgggaggccat
gcgaccaaggacaagaaagagctcgagaaggctggcaagattgccactgaggccatagag
aacatccgtacagtggtgtcgctaacgcgagaagagacatttgaggcacactaccaggag
aaccttatcgttccatacaagaactctgtgaagaaggcccatgtctttggcttcaccttc
tccttctcccaggccatgatctactttgcctatgctggctgcttcagatttggtgcctgg
ctcatcgaacagaaccagatgacctttgaagacgtcttcttggtcatctcagcagtgata
tatggggccatggcagtaggagaggccaactctttcacgcccaactatgccaaagccaaa
atgtccgcctcgcacatcaagatgcttgtcgataaggtgcctgccatcgacaattcttca
gaggagggggaacaaccggacaagtttgaggggaacgtgaacttcgagaatgtgcacttc
cactacccctcgcggcctgacgtaacggtgctgaaggggctgcgtctgcgcgcgcggaag
ggccagaccatcgccctggtgggcagcagcggctgcggcaagagcaccaccatccagctg
ctggaacgcttctacgaccccacacacggctctgtgaagttagacaagaatgactcccgt
cagctgaacatccactggctgcgtgctcagatgggcatcgtgtcccaggagccaatcctg
ttcgactgcagcctggcggagaacatcgcctatggcgacaacagtcgtgaggtcacgcaa
gaagagatcgaacaagccgccaaggctgccaacatacactccttcatagaggggctgcca
cagaagtaccagacccaggcgggggacaagggaacgcagctgtcgggggggcagaagcag
cggatcgccatcgccagggcgatactgcgcaaccccaaactactgctcctggacgaggcc
acctctgcactggacacggagagcgagcagatagtccaggaggcgctggacaaggcccgc
gagggccgcacgtgcatcgtggtggcgcaccgcctctccaccgtccagaacgccgacgta
atcgccgtgttccagaacggcgtggtggtggagcagggcactcaccagcagctgctcagc
aagcaaggcgtctactacaccctggtcacctcccagatgggacagcagcattga
DBGET
integrated database retrieval system
