Alosa sapidissima (American shad): 121719925
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Entry
121719925 CDS
T11137
Symbol
gata6
Name
(RefSeq) transcription factor GATA-6
KO
K17897
GATA-binding protein 6
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121719925 (gata6)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121719925 (gata6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
121719925
NCBI-ProteinID:
XP_041961626
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All DBs
Position
1:complement(50294873..50301723)
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AA seq
499 aa
AA seq
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MDLGQNSWSMVKREVTSSPGSPAEQSYLQGDRRDRHTSDELRSPAPLHTHLDSVGTRRTE
GRSLHSYVHFGHHNTALPNSEDITLFTDLDQGNKLIISGGAHKSGLIVDPSDMYQTLAIA
AAQTQAGYDSPTASYMHSNPNSPVYVPTSRVGPMIPSLPYLQNGSSQPSHSVNSHSVWSQ
PTPESPSYSTGSPHTSNRFHYSPSPPMNNGTSRDSSYTSPLNVNSRDQYNLTRPISGSYT
SPYPSYVAPQLSQLSTPWPGGPFENSMLHSLQTRGASLSIRGPNGDILDDMVESRECVNC
GSISTPLWRRDGTGHFLCNACGLYSKMNGLSRPLIKPQKRMSSSRRIGLSCANCQTSTTT
LWRRNAEGEPVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKPKTLNKSKGSSGSSSVPMT
PTSSSSSNSEECTKNSSPTTQVSSVNPSAMAAQAEVVSSTDSVVKYPGQEGLYTSVGLTS
SADGTASVRGETWCPMALA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggtcaaaacagctggtcaatggtcaagcgtgaggtcaccagcagcccaggg
tcgccggctgaacagagctacctacagggtgacaggagggaccgccacacctcagatgag
ttgaggtcaccggcgccactgcacacgcatcttgactctgtgggaacccgacgcacagag
ggcaggtctctacactcctacgttcactttggacatcacaacaccgccctaccaaactca
gaggatatcacgctgttcacggatttggaccagggcaacaagctcatcatctccggcggg
gcgcacaagagtggactaatcgtggaccctagcgacatgtatcaaacactggcaatcgcc
gcggctcaaactcaggcaggttatgattcgcctactgccagctacatgcactccaacccg
aattcacccgtttatgtgccgacctcccgggtcggacctatgattccgagtcttccttac
ttacaaaacggatcgtctcagccaagtcattcggtgaacagccattcggtatggtcgcag
ccaacccccgagagcccgtcgtacagcacagggagccctcatacctccaatcgtttccat
tactctccaagcccgccaatgaacaatgggacatccagggacagcagctatacaagtcct
ctgaatgtcaacagcagagatcagtataaccttacccgaccgatcagtggttcctatacc
agcccctacccatcctatgtggcaccgcagctatcccagttgtccactccatggcctgga
ggaccatttgaaaactccatgctacattccttacaaacaagaggcgcatccttatctatc
agaggacctaatggagatatactggatgacatggtggagagccgggagtgtgtcaactgc
ggctccatatccacaccgctttggaggcgtgacggcacgggtcattttctctgcaacgca
tgtggtctctacagcaaaatgaatggactcagccggccattaattaaaccccagaagcgc
atgtcgtcatccaggcggatcggcctctcctgtgccaactgccagaccagcaccaccact
ttgtggcgcaggaacgccgagggagagccagtgtgcaacgcttgcggactttacacgaaa
ttgcacggggtaccacggccactagctatgaagaaagagggtattcagacgcgaaaacga
aaaccgaaaacgttgaacaaatccaaaggatcctccggaagcagctctgttcccatgact
ccgacctcgtcctcgtcttccaactctgaagagtgcacgaagaacagctcaccgacaacg
caggtgtcttcggtgaacccctctgccatggctgctcaagcagaggtggtcagctcgacc
gactccgtagtgaagtaccctggacaggaggggctgtataccagtgtgggactcacatcc
tcagccgacgggactgcctccgtccgaggagagacctggtgcccgatggccttggcttga
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