KEGG   Alosa sapidissima (American shad): 121719934
Entry
121719934         CDS       T11137                                 
Symbol
cldn12
Name
(RefSeq) claudin-12
  KO
K06087  claudin
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad03272  Virion - Hepatitis viruses
asad04382  Cornified envelope formation
asad04514  Cell adhesion molecule (CAM) interaction
asad04530  Tight junction
Brite
KEGG Orthology (KO) [BR:asad00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    121719934 (cldn12)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    121719934 (cldn12)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    121719934 (cldn12)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    121719934 (cldn12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:asad03037]
    121719934 (cldn12)
   04147 Exosome [BR:asad04147]
    121719934 (cldn12)
Cilium and associated proteins [BR:asad03037]
 Other cilia and associated proteins
  Stereociliary proteins
   121719934 (cldn12)
Exosome [BR:asad04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   121719934 (cldn12)
  Exosomal proteins of colorectal cancer cells
   121719934 (cldn12)
SSDB
Motif
Pfam: PMP22_Claudin MamF_MmsF
Other DBs
NCBI-GeneID: 121719934
NCBI-ProteinID: XP_041961637
LinkDB
Position
10:complement(34714361..34719547)
AA seq 362 aa
MSCRDIHATNAFSFVIAMLSVGGLLVATLVPQWRTTRLITFNHNARNVTVYDGLWTKCVR
RDGSTGCYYYDADWWVKVDQLDLRLLQFCLPTGLALATLALLLIMMGMCKTSCCSGEPED
IKNSRCLVNSVGCHLVAGFFLFLGGAVAMPPAVWFLFHTDDLNARYDNVFAVDFAVYVAI
GSAGGLLLAALLMFMWYCMCKKLPSPFWLPFPEPPVMPTSLSAQPLTLHANGMPHSPGAY
APQHYQPSVMEVPGFAAAPGYPAGIAGPPMPHGHAQPVYMPQMTGPDGYGSEVGVSQPYG
YAPSQGYAPSQSYAPSQSYAPSQGYAPSQSYGGSQRYASHRYSTRSRLSGIEIDIPVLTE
SH
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgtcgtgccgcgacatccacgccaccaacgccttctcgttcgttatcgccatgctgtcc
gtgggcgggctgctggtggccactctggtcccccagtggcggaccacgcgcctcatcacc
ttcaaccacaacgcccgcaacgtgaccgtctacgacggcctgtggaccaagtgcgtgcgg
cgcgacggcagcacgggctgctactactacgacgccgactggtgggtgaaagtggaccag
ctggacctgcggctgctgcagttctgcctgcccactgggctggccctcgccaccctggcg
ctcctcctcatcatgatgggcatgtgcaagacgtcctgctgctccggcgagcccgaggac
atcaagaacagccgctgcctggtcaacagcgtgggctgccacctggtggccggcttcttc
ctgttcctgggcggcgccgtggccatgccgccggccgtctggttcctgttccacacggac
gacctcaacgcgcgctacgacaacgtgtttgcggtggacttcgccgtgtacgtggccatc
ggcagtgcgggcgggctgctgctggccgcgctgctcatgttcatgtggtactgcatgtgc
aagaagctgccctcgcccttctggctgccgttccccgagccgcccgtcatgcccaccagc
ctgtcggcgcagccgctcaccctccatgccaacggcatgccccactcgcccggtgcctac
gctccccagcactaccagccctccgtaatggaggtgcccggcttcgccgctgccccaggg
taccctgccggcatcgctggaccgcctatgccccacggccatgcccagccagtctacatg
ccacagatgactggcccagatgggtatgggtctgaggtgggtgtctcccagccatacggc
tatgccccctctcaaggttacgccccgtcacaaagttacgccccctcccagagctacgcc
ccttcgcaaggctacgccccttcgcagagctacgggggatctcagagatacgccagccac
cggtactccacccgctcgcgcctctctggcatcgagatcgacattcctgtcctcacagag
tcacactag

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