Alosa sapidissima (American shad): 121720054
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Entry
121720054 CDS
T11137
Name
(RefSeq) cingulin
KO
K06102
cingulin
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121720054
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GFIT
Motif
Pfam:
Myosin_tail_1
CCDC39
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
121720054
NCBI-ProteinID:
XP_041961821
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Position
10
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AA seq
1231 aa
AA seq
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MSAAPGSKAPVDYGLQIRFINDLQDSGGGPGSGGVSRRDAPSNAPSSGGGGRPSRYGVAV
RVQGIAGQPYVVLKEGQKGDSYGVQLKTHSYNSLPRHREAPGQRSYPPADDSGYLRRAQS
HGSLLDRDGDASDEFPDHLGRPPGDGRSGSYGNLDGGLGVGRERGRRGGGGGGLQRNQWG
GSHGVGLNGSPGTGSEYGSSESFPDSPPRAASAPHRQPPPTHPPPHQPQQPPHHQPTPHQ
PQQPPPNHIPVNRLISQFNGGRSTGGAARGRSPDVDSGRPAAPPPYAAASLVSNPYSSLP
SSSQSSLGRGAGSVGKVTPVHNSTSPSSANEWQSQGRYVAVETAPANQVEAQVTPDLLLD
QGQSSGSEFSNEDDQIQQMIYSVLRQGSTESDAVIKQKVRVLCSKIHTLKGPQAVRADPI
LKAELEESRDECLNLQEQLDRKKIELHQIHTELTQLRMDRESAEARVREQEDQLAGLQDE
LRREAENRAHTDTLQTELMALQAEQVDSQAARQKLDEALRQRERELTALKGALKDEVATH
DREIEALREQYSQDMERFRLNMEQVSQSQAGIEAERQRVNSSVRSLQQQLEESREEGEHW
RTQFQSSRDELRSTKQELLQARLEKDEFEEELKELQEKVELMKQQMPDPKQADALKKELE
RCRGDLKEAQAEVEKVRSERDRKLMEVVTLKKSHQEQEAELTYERDRLLEQTRRHKDELA
KAHEKAKTLAEPSLVEALRVELKEAESECVHLRGRLADQDEELQTERERLMSTQTQLHTL
RHQREEQEDAHTRLREKLTRLESQLQERECQSSEAEQELQQEVQRLKVQLDEARRGSSTL
GRERDELTFRLEEGEREKESLRKEIGLLEDQKRQAERTLDRLTKELEQASAEGRKAVEVV
QVQLEEQRERGRRDQQEHQKLGRERLAELEKAQSALRSVQDELSRQKKEYIACSEEKDNA
LLDRELLTNRLRHLEVEVENQRGSHSDKTREMRSMEDKMKHLELELEEERNTVELMTDRI
NRSRDQIEQLRSELMQERSSKQDLELDKNALERQIKEFKSRVVEMEGQSRSSSGVSQLES
KVLELEERLHSEEREKNAALSSQRRLERKLKDLNMALDEERQQSTDQRDQLSLRVKALKR
QVDEGESELERVEGLRRKALRDMEEQTELKEALQARVSALENELKRKAQQAMRPVLDSSA
LSSDDDYDDDLYDPTSIASILTESNLQTSSC
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgcccctggcagcaaggcccctgtggattatggcctccagatccgcttcata
aacgacctgcaggactcgggagggggcccaggttcgggcggggtatcccgacgagacgcc
ccgtctaatgccccctccagtggcggtggcggtcggccctcgcgctacggggtggcggtg
cgtgtgcagggcatcgctggccagccgtacgtggtgctgaaggagggccagaagggcgac
tcgtatggagttcaactcaagacgcacagctacaacagcctgcccagacacagagaggcc
cctggccagaggtcctacccccccgcagacgacagcggctatctccgccgcgcccagtct
cacggctccctgttggaccgagacggcgacgccagcgacgagttccccgaccacctgggc
cggcccccaggagatggacgctccggtagctacggcaacctggacggagggctaggagtt
ggaagagagagagggcggagaggaggaggaggaggggggttgcagaggaaccagtgggga
gggtcgcacggcgtggggctcaatggttcgccgggaacaggcagtgagtacggctcctcg
gagtccttccccgatagcccccctcgagctgccagcgccccacaccgccaacccccaccc
acccatcccccaccccaccagccccagcagcccccacaccaccagcccacaccccaccag
ccccagcagcccccaccgaaccacatccccgtcaaccgcctcatcagccagttcaacgga
ggccgcagtaccggcggagctgccagggggcgctctcccgacgtggactcgggacgcccg
gctgcccctcccccttacgctgccgcctccctcgtctccaacccgtactcctcgctcccc
tcgtccagtcagagcagcctgggccggggcgcagggtccgtcggcaaggtaacgccagtg
cacaattccacctctccctcatcagccaatgagtggcagtctcaggggcgatatgttgct
gtggagactgcacctgccaatcaagtagaggcacaggtaacccctgacctcctgctggac
cagggtcagagttcaggctcagagttctccaatgaggacgaccagattcagcagatgatc
tacagtgtcttacggcaggggagcacagagagtgatgctgtcatcaaacagaaggtccga
gtgctctgcagcaagatccacactctcaagggtcctcaggctgtgagggctgaccccatc
ctgaaggcagagctggaggagtcgagggacgagtgtctgaacctgcaggagcagctggac
agaaagaagattgagcttcatcagatacacactgagctgactcagttgcggatggacagg
gagagtgctgaggctcgtgtgcgggagcaggaggatcagctggctggactgcaggacgag
ctgaggagagaagccgagaacagagcacacaccgacacactgcagacggagctgatggcg
ttgcaggcagagcaggtggattcgcaggcagcgcgtcagaagctggacgaggcgctgcgg
cagagagagcgcgaactcaccgccctcaagggggcgctcaaggacgaggtggccacacac
gaccgcgagatagaggccctccgagagcagtacagccaggacatggagaggttccgcctt
aacatggaacaggtgtcacagtctcaggctggtatagaggcggagcggcagcgtgtgaac
agctcggtgaggtctctgcagcagcagctggaggagagcagggaggagggcgaacactgg
aggactcagttccagagcagccgggacgagctgcgctccaccaaacaagagctgcttcag
gctcgcttggagaaggatgagtttgaggaggaactgaaggagctgcaggagaaagtggag
ctcatgaaacagcagatgcctgaccccaaacaagcagatgcactcaaaaaggagctggag
cgttgccgtggcgatctgaaggaggctcaggcggaggtggagaaggtgaggtctgagcgg
gacaggaagctgatggaggtcgtgaccctgaagaagagccaccaggagcaggaggccgag
ctcacctacgagcgggaccgcctcctcgagcagacgcgccgccacaaagacgagctggcc
aaagcacacgagaaagccaaaacgctagctgagccctcattggtggaggctctgcgcgtg
gagctgaaggaggcggagtcggagtgtgtgcatctgcgtgggcgcctggcagatcaagac
gaggagctgcagacggagcgagagagactgatgtccacgcagacgcagctgcacacactc
cgccaccagagagaggagcaggaggacgcacacacacgcctcagagagaagctcacgcga
ctggagtcccagctgcaggagcgcgagtgccagagttcggaggccgagcaggagctccag
caggaggtgcagaggctgaaggtccagctggacgaggcccggcgaggcagctccacgctg
ggcagggagcgggacgagctgaccttccgcctggaggagggagagcgggagaaagagtca
ctgcgcaaggagatcggcctgctggaggatcagaagagacaggccgagagaacactggac
agactcaccaaagagctggagcaggcgtcggcggagggccgcaaggcggtggaggtggtg
caggtgcagctggaggagcagagggagaggggccgccgcgatcagcaggagcaccagaaa
ctcggacgcgagcgcctcgccgagctggagaaggcccagagtgcactgcgctccgtccag
gatgagctgtctcggcagaagaaggagtacatcgcgtgcagtgaggagaaggacaacgct
ttgctggaccgggagctgctgaccaatcgcctgcgccacctggaggtggaggtggagaac
cagcgcggcagccacagcgacaagacccgagagatgcgcagcatggaggataagatgaag
catttggagctggagctggaggaggagaggaacacagtggagctgatgactgatcgcatc
aacaggagcagagaccagatagagcagctgcgctctgaactcatgcaagagaggtcctcc
aaacaagatctggaactggacaaaaatgccctggagagacagataaaggagtttaagagc
cgcgtggtggagatggaagggcagtcacgctcctcgtctggtgtctctcagctggagtct
aaagtccttgagctggaggagagactgcactctgaggagagggagaagaatgctgccctg
tcctcacagcgtcgcttggagaggaagctgaaggaccttaacatggcactggatgaggag
agacaacagtctactgaccaaagagaccagctgtctctgcgggtgaaggccctgaagcgg
caggtggatgagggggagagtgagctggagcgggtggagggtctgcgcaggaaggccctg
agggacatggaggagcagacggagctcaaggaggccctgcaggcacgcgtcagcgccctg
gagaacgaactcaagaggaaggcccagcaggccatgcgtcccgtgctggactcctccgcc
ctcagctcagacgacgactacgacgacgacctgtacgaccccaccagcatcgcctccatc
ctcaccgagagcaacctgcagaccagctcctgctga
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