Alosa sapidissima (American shad): 121720097
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Entry
121720097 CDS
T11137
Symbol
pex5
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X1
KO
K13342
peroxin-5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121720097 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121720097 (pex5)
Membrane trafficking [BR:
asad04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121720097 (pex5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_17
TPR_16
TPR_8
TPR_11
TPR_19
TPR_14
TPR_CcmH_CycH
TPR_12
TPR_7
CFAP70_mid_TPR
CFAP70_TPR_C
TPR_20
TPR_Slam
RMD1-3
ANAPC3
TPR_9
MAS20
PEX18_PEX21_C
CABIN1_N
Connexin50
CNOT10_TPR
Secretin_N_2
RMD9_mid
Motif
Other DBs
NCBI-GeneID:
121720097
NCBI-ProteinID:
XP_041961893
LinkDB
All DBs
Position
10
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AA seq
641 aa
AA seq
DB search
MAMRELVEAECGGANPLMKLTGHMTQEGGPWRHRATPNLPPTPIEIATEEELVNEFLQAP
PRPPHSFDMGQLLEEMQQIDQQSYRQAPQRAPGVAALALSGDWASEFVAGADAASSSGQV
GLGEGADADWTKEFISEVADPGRWAEEYLEQSEEKLWLGDLGEKERDKEWTQEYQPGDEL
KQTANELLAKVDDPKLQNTEFLRFIRQIGEGSVTVEDSAGKQDTDRAQAKEAQRWASSLN
QVSAESAESWVDEFATAGPDFQQAKAAVESDVDFWEKLQQEWEEMAKRDAESHPWLSDFD
QLLSTSYDKGYQFEEENPYMSHDSPLAEGIKRMEAGDIPGAVLLFESAVQREPDNQLAWQ
YLGTCQAENEQEFAAISALRRCIDLKKDNLTALMALAVSFTNESLHRQACETLRDWLRHN
PKYRHILEQSEREKERDGAREREKERERFGSLLPEGLFTEVQSLFLSAAASDPNHVDPQL
QCGLGVLFNLSGDYDKAVDCFTAALSVTPQDYLLWNKLGATLANGSRSEEAVDAYRRALE
LQPGFVRSRYNLGISCVNLGAHREAVEHFLEALSLQRQASVEGPVGRAGAAATMMSDNIW
STLRMALSMMGESSLYAAADRRDLDTLLAHFCQREGEPGPE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagctggtggaagcggagtgtgggggagccaatcccctcatgaagctg
actggtcacatgacacaagaaggagggccttggaggcatcgggcaacgcccaatcttcct
cctacacccattgagatagcaactgaggaagagttggtgaacgagttcctgcaggcccct
ccacggcctcctcatagctttgacatggggcagcttttggaggagatgcagcagattgac
caacagagctacagacaagccccacagcgagcgcctggagtggctgcgttggcgctgtct
ggcgactgggcctcagagtttgtagctggcgctgatgccgcctcctcgtcagggcaggtg
ggcctgggcgaaggagccgatgctgattggacaaaggaattcatcagtgaagtggcagat
cctggtcgttgggctgaggagtatctggaacaatcagaggagaagctgtggctaggagac
cttggcgagaaagagagagacaaagaatggacacaagaataccagcccggagatgagctc
aaacaaacagccaatgaacttcttgcgaaagtggatgaccctaagctacagaacacagaa
ttcctgcggttcattaggcaaattggcgagggaagtgtgactgtggaagacagtgcaggc
aaacaggacacagatagagctcaggccaaggaggcacagcgctgggcctcaagcctcaac
caggtgtcggcggagtcggctgaatcgtgggtagatgagtttgccacggcaggaccagat
ttccagcaggcaaaagctgcagtggagagcgatgtggatttttgggagaagctgcagcag
gagtgggaagagatggccaagagggatgcggagagccacccctggctgtccgattttgac
caactgctcagcacctcctacgacaagggatatcagtttgaggaggagaacccatacatg
tcccatgacagtcccctggctgaggggatcaagaggatggaggcaggagacataccgggg
gcggtgctgctctttgagagtgcagtgcaacgggaaccagacaaccagctggcttggcaa
tatctgggaacctgtcaagcagaaaatgaacaagaatttgctgctataagtgccctccgc
agatgtatagatctgaagaaggacaacttgactgcgctgatggctttggctgtcagcttc
accaacgaatcgctgcacaggcaggcctgtgagacgctgcgcgattggttgaggcacaat
cccaagtaccgccacatcctggagcagagcgaacgggagaaggagagggacggcgctcga
gagagggagaaggagagggagcgatttggatcccttttgcctgagggtctgttcacggag
gtccagtccctgttcctgagtgcagcagcttctgaccccaaccatgtggaccctcagctg
cagtgtggcctgggcgtactctttaacctgagtggcgactatgacaaagctgtggactgt
ttcaccgccgctctgtcggtcaccccacaggactacttgctgtggaacaaactaggtgcc
accctggccaatgggagccgctccgaggaggctgtcgacgcctacaggagagccctggaa
ctgcagcctggatttgtgcgcagccgctacaacctgggcatcagctgtgtcaaccttgga
gctcacagagaggcggtggagcactttttggaggctttatccctccagcggcaggcttct
gtggaggggcctgtgggcagggccggcgccgcggcaaccatgatgtccgacaacatctgg
tccactctgcgcatggccctgagcatgatgggagagagctcgctgtacgctgcggcagat
cgccgcgacctggacactctactcgcacacttctgccaacgggagggggagcctggacca
gaatga
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integrated database retrieval system
