Alosa sapidissima (American shad): 121720103
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Entry
121720103 CDS
T11137
Symbol
hoxa10b
Name
(RefSeq) homeobox protein Hox-A10b
KO
K17443
homrobox protein Hox-A10
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121720103 (hoxa10b)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121720103 (hoxa10b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
121720103
NCBI-ProteinID:
XP_041961903
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All DBs
Position
10:12010291..12013982
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AA seq
351 aa
AA seq
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MFCTRNVSQTGILPPSKYTTKMSCSDNPAGNSFLVDSLINGRIEGSGSCYPSAGLYLPPG
SEYSYGLPNCGYFPGFKRSEGQSQTVVPSSSPYPQGMDAWLGASRSCRVEQTISQPARTF
SPSIKEESSYCLYEPEKCPKDSLTEEVYSRGTPDSCPVNSSGTVPVPGYFRLSQTYTTSK
CFSELQSNSPHFPPPRAACFDTSPSASPAPETVRRESDAPPTCAPCTPARDKETQDYSAG
ASSSPEPADSLANSSAKPKKGESRSDGTASWLTAKSGRKKRCPYTKHQTLELEKEFLFNM
YLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMSRENRIRELSANYGFS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtacaagaaatgtcagccagacagggatccttcctccgtcaaaatataccaca
aagatgtcatgctcggataacccggctggaaattcgtttctggtggactccctaatcaac
ggacggatcgagggcagcggctcgtgctacccgagcgctggcttatatttgccccctggt
tccgagtattcctacggactacctaactgtggctatttccctggatttaaacgcagcgag
ggtcagtctcagactgtggtcccatcatcgagcccttatccgcagggcatggacgcatgg
ctgggggcgtctcggtcgtgtcgcgtggaacagaccatcagccaacctgcccgcaccttc
tccccgagtattaaggaagagagctcgtactgtttgtacgaaccggagaagtgtcccaaa
gactcactgaccgaggaggtgtactcgcgcggaacgccagactcgtgtccagtgaacagc
agcggcaccgttcccgtacccggttacttccgcttgtctcagacatacacgacctcaaaa
tgtttctctgagcttcagtccaattcccctcactttcctccaccacgcgcagcctgcttc
gacacctcaccgtcggcctcgcctgcaccagagacagtcaggcgagagagcgacgcaccc
cctacatgcgcaccttgcacaccagcgcgagacaaggagacgcaggactattccgccggt
gcctcgtcgtcgcccgagcccgcggacagcctcgcaaacagctctgcaaagccgaagaaa
ggtgagtcgcggagtgatggcacggccagctggctaacggcgaagagcggccggaaaaag
cgctgcccgtacaccaagcaccagacgctcgagctggagaaggagttcctgtttaacatg
tacctgacccgcgagcggcgcctggagatcagccgcagcgtgcacctcacagacagacag
gtgaaaatctggttccagaaccgccggatgaagctcaagaagatgagtcgcgagaacagg
attcgagagctttcggccaattacgggttttcctga
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