KEGG   Alosa sapidissima (American shad): 121720118
Entry
121720118         CDS       T11137                                 
Symbol
itga10
Name
(RefSeq) integrin alpha-10
  KO
K06586  integrin alpha 10
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04510  Focal adhesion
asad04512  ECM-receptor interaction
asad04810  Regulation of actin cytoskeleton
asad04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:asad00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121720118 (itga10)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121720118 (itga10)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121720118 (itga10)
   04810 Regulation of actin cytoskeleton
    121720118 (itga10)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:asad04515]
    121720118 (itga10)
Cell adhesion molecules [BR:asad04515]
 Integrins
  Integrin alpha subunits
   121720118 (itga10)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 Integrin_A_Ig_3 FG-GAP_3 VWA_2 ITGAX-like_Ig_3 vWA_SIBA-E
Other DBs
NCBI-GeneID: 121720118
NCBI-ProteinID: XP_041961931
LinkDB
Position
10:complement(7897070..7939151)
AA seq 1171 aa
MELRKYLLLLEYIVLLKGLCQCFNIDVTRPRIFTGPEDTQFGFSVLQHEADGEKSMLVGA
PWDGAPNNKKGDIYKCSMGNERNSNCTKLNLGDTALANVSRNLKNSHLGMTISPNTPDGL
LACAPLWSQECGTSMFSTGICASLYDDLEPKATIKPTAQRCSTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEIAVHEWSLKDYQSKEEVVEAAKNISRQEGR
ETRTAYAIHMGCTEAFSPERGAREGAMKVMIVVTDGESHDGEELPEALAECEQRNITRYA
IAVLGHYIRRQQDPEAFIDEIKYIATDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GNNQSSFVKEMSQIGFSTHALDDGILFGVVGAYDWDGGVLKESSEGTFMPPREAFESEFP
LELKNHAAYLGYTVSSVVVGDWRRLYVAGAPRFKHKGKVILFDLSSTGDVTISQALNGEQ
IGSYYGSEVCGVDVDHDGITDVLLVAAPMFLGAGNREAGKVYVYSLDGDGFAPNGTLQSQ
QKAQDARFGYAMAAVPDLNHDGYADVLIGAPLEDEHKGALYVYHGDEFYIIPQYKQRIAG
STLSPGLQYFGRSVSAQMDLDGDNLLDLAVGAQGRAILLSSRNIVQINVTLAFHPPSINV
IQKNCQRGGRESACLNASACFLAHTRLPRASGNYFELHVGALLDDRKLSARALFDNNSQR
QTSIGVRLRVGTPTCHPLPFHVFDTADYIRPISFTLRFKINDTEGAPVLDEGWPTTIKKS
IPFFKDCGEDDVCVTDLVLQAHMNISGTRQQPYVIRSPRRRLGVEVQLSNLLENAYNTSL
TMQYSKNLHFSSLSIRDDVHFKIECTAVNSNTHSCNVSYPVFRSHSKVNFILEFEFSCTS
LTSKVQMKLTASSDSVEREDTLGDNSVQLQTIVQYEPDLFISSESNLNRYEVHPTRTVSE
AMGPEFYTYFRVQNLGCYSVSNLELSIHLPAVAVGDRTFMYVAEAFSHNTSGVNCSIRSD
LPQLKDRQKDVWPLHPEDMLKTDLLNCTRSWCVEVTCQIQQLLKAQSALIRLTRRVNDNF
FRQAKFKSVRIVGSYTLTVKESNLIKLGSAAIWRETVLEILKGRSIPISLWILIGSIIGG
LLLLALIIFILWKLGFFARKQRKESEEDKDD
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggagttacgcaaatacttgctactacttgagtatattgtgcttcttaaaggtctgtgt
cagtgcttcaacattgatgtgacgaggccgcggatcttcactggaccggaggacacgcag
tttggcttctcagtgctccaacacgaggccgatggggagaaatcgatgttggtgggggca
ccttgggatggggcgcccaataacaagaaaggagacatatacaaatgcagcatggggaat
gagcgcaactccaactgcaccaagctcaacctgggtgatacagctttagcgaatgtatct
cgaaaccttaagaactctcacctgggcatgaccatcagccccaatacacctgatggcctc
ctggcttgtgcacccttgtggtctcaggaatgtggtacgtctatgttcagcactgggatc
tgtgcatcattgtatgatgacctggagcctaaggcgaccattaaaccaactgcacaacga
tgctccacgtacatggacatagtcatagttctagatggatccaacagcatctacccctgg
tatgaagtccagaacttcctcagcaacatcctcagcaagtttcacatcagcccagaacag
atgcaggtgggtgtcttgcagtatggagagatagcagtgcatgagtggtcgctgaaggac
tatcagtcgaaagaggaagtggtagaagcagccaagaacatcagccgtcaagaggggcgt
gagactcgcaccgcatacgccatccacatgggctgcacggaggcattcagtcctgagaga
ggggcgagagaaggggccatgaaggtgatgattgtggtgacagacggagagtcacatgac
ggagaggagcttcctgaggcgctagccgagtgtgagcaacgcaacatcaccagatacgcc
atcgcggtgttgggccattacatccgcagacagcaggacccagaggccttcatcgatgag
atcaagtacatcgccactgacccggacgagaagtacttctttaacgtgacagacgaggcg
gccctaaacgacatcgtggacgctctaggagaccgcatcttcagtctggaggggactttg
ggaaacaatcagagctcatttgtgaaagaaatgtctcagatcggcttctccacacatgcc
cttgatgatgggatcctgtttggggtggtgggcgcgtatgactgggatggaggcgtgctg
aaggagagcagcgagggcaccttcatgccccccagggaggctttcgagagcgagttcccc
ctggagctcaagaaccatgccgcctacttgggctacactgtgtcatcagtggtagttggt
gattggaggaggctgtacgttgctggggcaccgcgcttcaagcacaagggaaaggtcatc
ctgtttgacctcagctccacgggtgacgtcacaatctcacaggccctcaacggagaacag
atcgggtcgtactatggcagcgaggtgtgtggggtggatgtggaccatgacggcatcaca
gacgttctgctggtggcagcgcccatgttcttgggtgcggggaaccgcgaggcggggaag
gtctacgtgtacagtctggacggggatggctttgcccctaacggaacactgcagtcgcag
cagaaggctcaggatgcccgcttcggttatgccatggctgctgtgcccgacctcaaccat
gacggctatgcagacgtgctgatcggagcgcctctggaggacgagcacaagggggcactc
tatgtttaccatggcgatgagttctacatcatcccccagtacaaacagcgtatcgctggc
tccactctgtcgccaggcctgcagtatttcggccgcagtgtgagcgctcagatggaccta
gatggggacaacctgctggacctggctgttggagcacaaggccgtgctatactactcagc
tcacggaacatcgttcaaatcaacgtgactctggccttccaccctccctccatcaacgtc
atccagaagaactgccagcgcggcggccgagagtccgcctgcctcaacgcctccgcctgc
ttcctggcccacactcgcctgccccgagcgtctgggaactacttcgagctgcatgttggg
gccttgttggacgacaggaaattgtcggcacgcgcactcttcgacaacaactcccagcgc
cagaccagcataggtgttcgcctccgggttggcacacccacgtgccaccctcttcccttc
cacgtgtttgacacagctgattacatccgaccaatcagcttcaccctccgcttcaagatc
aatgacactgagggtgccccggtgttggacgagggttggccaaccaccatcaagaagtct
atccccttctttaaggactgcggtgaggacgatgtgtgtgtgaccgatctggttctgcag
gcccacatgaacatctctggaacaaggcagcagccgtatgtgattcggagcccgcgcagg
cggctcggtgtggaggtgcagctgagtaacctcctggagaacgcctacaataccagcctc
accatgcagtactctaagaacctgcacttctccagtctcagcatacgggatgatgtccat
tttaagattgagtgcacagcggtcaactccaacactcactcctgtaatgtgagctaccca
gtgttccgctcccactctaaggtcaacttcattttggagtttgagttcagctgtacgtcc
ctcaccagcaaggttcagatgaaactcacggcatccagtgacagtgtggagagagaggac
actctgggagataacagtgtccagctgcagaccatagtgcagtatgagcctgacctcttc
atctccagtgaatcgaacctgaatcggtatgaggtgcatcccacccggactgtctcagaa
gccatgggaccagagttctacacttacttcagggtgcagaatctgggttgttactcagtc
agtaatctggagttgagtatccaccttcctgccgtggctgtgggggacaggaccttcatg
tatgtggctgaggccttctcacacaacacgtcaggtgtgaactgcagcatcaggagtgat
ctccctcaactgaaggacagacagaaggacgtgtggccactgcacccagaggacatgctt
aaaactgacctgctgaactgcacaaggtcatggtgtgtggaggtgacatgccagatacag
cagctgctcaaagcccagtctgcactcatacgcctcaccaggagagtgaatgacaacttc
tttagacaggcaaagtttaagtcagtgcggattgttggctcctacacactgactgtgaaa
gaatccaacctgataaagctgggcagtgctgccatctggagggagacggtactggagatt
ctgaagggccgctccatccccatctctctgtggatcctgattggcagcatcatcggcggc
ctgctgctacttgccctcattatcttcatcctgtggaagttgggattctttgcaagaaag
cagaggaaggagtcagaggaggacaaagatgactga

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