Alosa sapidissima (American shad): 121720167
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Entry
121720167 CDS
T11137
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121720167 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121720167 (washc5)
Membrane trafficking [BR:
asad04131
]
Protein recycling
Others
WASH complex
121720167 (washc5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
Motif
Other DBs
NCBI-GeneID:
121720167
NCBI-ProteinID:
XP_041962016
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All DBs
Position
10:complement(31254478..31265905)
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AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAILRIVSRGNAIIAELLRLSEFIPVVFRLKDKSDQQKYGDIICDFSY
FKGPEYYEGKLEAKPELQDLDEEFRENNIEILSRFYLAFESVHKYVVDLIRYLDDLNEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGASSQPGSKRPANYPESYFQRVPISPTFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLYFTPSILHTQQAKMREIVDKYFPDNWVISIYMGITVNL
IEAWEPYKAAKTALNYTLDTANIREQASRYAASMDSLKPHVQQLLKEGFLREEIVLDNIP
KLLNCLRDCNVAIRWLMLHTAESAYDPNNKRLRQIKEQVINDSKYSSKILFQLLLDTAQF
EFILKEMFKQMLTEKQLKWESYKREGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQLIDSFTSIMQESIRASPAMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQFYSGELVAYVRKVLQIIPESMFTSLAKIIKLQIHDIMEVPTRLDKDK
LKDYAQLGARYEVAKLTHAISVFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVRRVAY
SLHKGLIFNPKAKPSELMPKLKEMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRTKIQDWQSVYQSTHIPIPKYPPMDESATFIGRLCREILRITDPKVTCYI
DQLNTWYDLKTHQEVTNNRLFSEIQDTLGTFGLNGLDRLLCFMIVKELQNFLTVLQKTIL
RDKVVTDVFKALLSAVNPVKGIVANATKVYPNAMAKTQKIWPAYLESIMKVGQMQILRRQ
IANELNYSCKFDSKHLAAALENLNKALLADIEAHYQDPSLPYPKEDNTLLYEITAYLEAA
GIHNPLNKIYITTKRLPYFPIVNFLFLIAQLPKLQYNKNQGMTCKKAADAVDWPPLVLGL
VTLLKQFHSRYTEQFLALIGQFIRSIMEQCTSQKIPDMPSDVVSALMFLEDYVRFSKLPR
KVAEAHVPSFIFDEFRTVM
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggactttctggcggagaataacttgtgcggtcaggccatccttaggattgtgtcc
aggggaaatgccatcatcgccgagctgctccgcctctccgagtttataccagtggtcttc
agactaaaggacaaaagtgatcaacagaaatatggagacatcatatgcgacttcagctac
ttcaaggggccggagtattatgaggggaaactagaagcaaaaccagaacttcaagaccta
gatgaagaatttagggaaaacaacattgaaattctgtcacggttttacctggcatttgaa
agtgtccataagtatgttgtggacctgataagatacctagatgaccttaacgaaggagta
tacattcagcagaccttggagaccgtactcctgaatgaagatggaaaacagctcctgtgt
gaggccttgtatctgtatggagtgatgcttctggtcattgatcagaagatcgagggagag
gtcagggagaggatgttggtgtcctattacagatacagtgctgcccgatcctctgcggac
tccaacctggacgacatctgcaagctgctgcgcagcaccggagcctccagccaaccgggg
tccaagcggcccgctaactacccggagagctacttccagagggtccccatcagccccacc
ttcatcagcatggtcatcgggaggctgcgctcagacgacatctacaaccaggtgtctgct
tacccacttcctgagcatcgcagcacagctcttgccaatcaggcagccatgctgtacgtc
tgcttatacttcactcccagcatcctccacacacagcaggccaaaatgagagagattgtg
gacaaatacttccctgacaactgggtcattagcatatacatgggcatcactgtgaactta
atagaggcatgggagccctacaaagctgccaaaactgccctgaactacacgttggacacc
gctaatatcagagaacaggcaagccgctatgctgctagcatggacagtctgaagcctcac
gtccagcagctgctgaaagagggcttcctcagagaagagatcgtcctggacaatatcccc
aagctgctcaactgcctgcgcgactgcaatgttgccattcgctggctaatgctccatacg
gctgaatcagcctatgacccaaataacaaaaggctgcgtcagatcaaagagcaggtcatc
aacgactccaagtacagctccaagattctcttccagttgctgctggacactgcccagttt
gagttcattctgaaggagatgttcaagcagatgctgacagagaagcagctgaagtgggag
agctacaagcgtgagggctcggagaggatgaccgagctcgccgaggtcttctctggggtc
aagcctctcacaagggtggaaaagaacgagaatctacaggcctggttcagagagatctcc
aaacagattgagtctctcaattatgaagactccacagctgctggaaggaagactgtgcag
ctcattcaggctttagtggaggtgcaagagttccatcagctggagtcgaacctgcaggta
tgccagttcctggctgacacacgcaagttcttgcaccagatgattcgcaccatcaacatc
aaggaggaagtgctgatcaccatgcagatcgtgggagatctgtcatacgcctggcagcta
atagacagcttcacatccatcatgcaagagagcatcagagcgagcccagcaatggtgacc
aaactccgtgccactttcctcaagctggcctctgcactggatctgccactgctgcgtatc
aaccaggccaacagcccagatctactcagcgtgtcccagttctactctggggagctggtg
gcctacgtccgaaaggttctgcagattattccggaaagcatgttcacatccctggccaaa
atcatcaaactgcagatccatgacatcatggaggtccccacgcgtctggataaggacaag
ctgaaggactatgcccagcttggggcccgttacgaggttgccaaactcacccatgccata
tctgtattcactgagggcattttgatgatgaagacgacgctggttggcatcatcaaggtc
gatcccaagcagcttctggaggatggaatcaggaaggagcttgtgaggcgtgtggcttac
tcgctccacaaaggccttatcttcaaccctaaggccaagcccagtgaactgatgcccaag
ctaaaggagatggctgccaccatggatgggttctaccgctcgtttgagtacatccaggac
tacgtcagcatctacggcctgaagatctggcaggaggaggtgtcccgaatcatcaactac
aacgtagagcaggagtgcaacagcttcctgaggaccaagatccaagactggcagagtgtg
tatcagtcaacacacatcccgattcccaagtatccccccatggacgagtctgccaccttc
attggacgtctctgcagggagatcctccgcataactgaccctaaagtgacctgttacatt
gaccagttgaacacgtggtatgacctgaaaactcaccaagaggtgaccaacaacagactg
ttctctgagattcaagacaccctggggactttcggtctgaacggcctcgatcggctcctc
tgcttcatgatcgtgaaggagctacagaatttcctgacggtgcttcaaaagaccatcctc
agggacaaagtggtgactgatgtgttcaaagccctgctgagtgccgttaaccctgtcaaa
ggcattgtggcaaacgccaccaaagtgtaccccaatgcaatggctaagactcagaagatc
tggccagcatatttggaatcgataatgaaggtcgggcagatgcagattctgaggcggcag
attgcaaacgagctgaactactcttgcaagtttgactcaaagcatcttgccgctgctctg
gaaaacctcaacaaagctcttttggccgatattgaggcccactaccaggacccgtctttg
ccttaccctaaggaggacaacacgcttctgtacgagatcactgcttacctggaggctgca
gggattcacaatcctctcaacaaaatctacatcacaacgaagcgcttgccctacttcccc
attgtgaactttctattcctcatcgctcagctccccaaactgcagtacaacaaaaaccaa
ggaatgacttgcaagaaggcggcagatgctgtggactggcccccactggttcttgggttg
gtcacacttctgaagcagttccactccagatacacagagcagttcctggccctgattggc
caatttatccgctccatcatggagcagtgcactagccagaagattcctgacatgccttca
gatgtagtgagtgcgctgatgtttctggaagactatgttcgcttctcaaaattgcctcgc
aaggtggctgaagcgcatgttccaagcttcatttttgacgaattccggactgtgatgtga
DBGET
integrated database retrieval system
