Alosa sapidissima (American shad): 121720328
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Entry
121720328 CDS
T11137
Symbol
stx17
Name
(RefSeq) syntaxin-17 isoform X1
KO
K08491
syntaxin 17
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04130
SNARE interactions in vesicular transport
asad04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121720328 (stx17)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121720328 (stx17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121720328 (stx17)
Membrane trafficking [BR:
asad04131
]
SNARE
Syntaxin (Qa)
Stx-sER
121720328 (stx17)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
IncD
Phage_holin_3_6
Serine_rich
Motif
Other DBs
NCBI-GeneID:
121720328
NCBI-ProteinID:
XP_041962242
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All DBs
Position
10:3657607..3667489
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AA seq
285 aa
AA seq
DB search
MTEGTGKLPLRRLEPPIHKFTKVAIPTDLQRLQQHQHNIEKFQRCRQWDRLHQEHINSSR
TVQQLRSNLWEMEKLCERVRAEDAAALDKLVQPIKEQASAAAQDFLRLHSEAVNHPLPSQ
PTASHTQHDPSCGDDDMATSLGVTQMQLPPIPLEQNAAESWDTLEEDLQELSGLVNEFAL
LVHSQQEKIDSIEENVSVAASNVEEGARSLGKAASSGLAVLPVCGALVGGVLGGPLGLLA
GFKLVGVASAIGGGILGFAGGNLIQKRKRERVDVQLQQLKNTHDD
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacggagggaactggcaaactgccgctcaggcgcctggaaccgcccatccataagttt
accaaagtggctattcctaccgatctgcagagacttcagcaacatcaacacaatatagaa
aagtttcagagatgtcgacaatgggacagactccaccaggaacacatcaactccagccgc
actgtgcagcaactgcgctctaacctgtgggagatggagaagctgtgtgagcgtgtccgg
gccgaggatgccgctgcactggacaaactggtccagccaatcaaagagcaggcatcagcc
gcagcccaggacttcctgcgtctccattcagaggctgtcaatcacccgctgccatcacag
ccaaccgcctcacacacacagcacgacccatcctgtggtgatgacgatatggccacctca
ctgggtgtcacacagatgcagctgccaccaattccactggagcagaatgctgcggagagc
tgggacactctggaggaggatttgcaggagctaagtggtttggtcaatgaatttgcctta
cttgttcattcacagcaggagaagattgacagcattgaggagaacgttagcgtggcggcg
agcaacgtggaggagggggcgcgcagcctcgggaaggctgctagctcgggattggccgtg
ctgccggtgtgcggagctctggtgggcggggttttgggtggacccctcggtttgttggca
ggatttaaattggtgggtgtggcctctgcaataggtggtgggattcttggatttgctggc
ggcaacctgatccaaaaacgcaaacgtgagcgtgtggatgtccaactccagcagctgaag
aacacacacgatgattaa
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