Alosa sapidissima (American shad): 121720376
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Entry
121720376 CDS
T11137
Symbol
onecutl
Name
(RefSeq) one cut domain, family member, like
KO
K08026
one cut domain, family member 1 (hepatocyte nuclear factor 6)
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121720376 (onecutl)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
121720376 (onecutl)
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GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121720376
NCBI-ProteinID:
XP_041962355
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Position
10:complement(30011174..30016212)
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AA seq
468 aa
AA seq
DB search
MNGNMGEMSVHSHVELAHPQDARDMLHTRDLSAAFPRPSLGDSVMGLEPDHRHPGFDSSM
SALGYGGRDTPTSEGSTYTTLTPLQPFDDKFHHHPHHHHPHHPCLPVSNVIGSFTLMRED
RGLGGNFYNPYGKDLGMSHSPPTATPGLEASMHGYGSLGSSQGSHAGQMLSSGHDMHLGS
SSGGGGGAGGIYCRTADFGREMSPPMLHGDHGLGHQLNKMEAHQHPAGSYHPHLYSQHYQ
QHLSSQQASKAREFHTVGSSSSASLPSDGVLSGSQSGGSGGGSGGGEEINTKDLAQRIIN
ELKRYSIPQAIFAERVLSRSQGTLSDLLRNPKPWGKLKSGRETFKRMSRWLQEPEFQRMA
SLRLEACKRKEQEQSKMERNQGPKRTRLVFTDLQRRTLLAIFRENHRPSKDLQVTISQQL
GLELSTVSNFFMNARRRNHNKWVEEGRPSSTGSSGSSASSSAVSCSTA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaatatgggagagatgtctgtgcacagccatgtggagctggctcacccacag
gatgccagggacatgctccacacgcgagacctctctgctgctttccccaggccttccctg
ggggactcggtcatgggcctggagcccgaccacaggcaccccggctttgactcatccatg
tcggccctgggctacggtggcagggacacccctaccagcgagggcagcacctacaccacc
ctgacccctctgcagcccttcgatgacaagttccaccaccacccccaccaccatcacccc
caccacccctgcctgccggtcagcaacgtcatcgggagcttcacgctcatgagggaggac
cgtggccttgggggcaacttctacaacccgtatggcaaagacctgggcatgagccactcg
ccgcccaccgccacgccgggcctggaggccagcatgcacggctacggcagcctggggtcc
agccagggcagccatgctggacagatgctctccagcggccatgacatgcacctcggcagc
agcagtggcggtggtggcggcgctggtggcatttactgccggacagccgacttcggccgg
gagatgtccccgcctatgctccacggtgaccacgggctcggccaccagctcaacaagatg
gaggcccaccagcacccggccggcagctaccacccgcacctctacagccagcactaccag
cagcacctgtccagccagcaggcctccaaggccagggagttccacaccgtcggctcctcc
tcctcggcctcgctgcccagcgacggcgtgctgtccggctcgcagagcggaggctccggt
ggaggctccggtggcggggaggagatcaacaccaaagacttggcccagcgtatcatcaac
gagctgaagcgctacagcatcccgcaggccatcttcgccgagagggtgctctcccgctcg
cagggcaccctgtccgacctgctgcgcaaccccaagccctggggcaagctcaagtccggc
cgggagaccttcaagaggatgtcccgctggctgcaggagcccgagttccagcggatggcc
tccttgaggctagaagcctgcaagcgcaaggagcaggagcagagcaagatggagcgcaac
cagggccccaagcgcacgcgcctggtcttcaccgacctccagcgccgcacgcttctggcc
atcttccgtgagaaccaccgtccgtccaaggacctgcaggtgaccatctcgcagcagctg
ggcctggagctcagcacggtcagcaacttcttcatgaacgcccgccgccgcaaccacaac
aagtgggtcgaggagggccgtccgtcctccacgggctcctccggctccagcgcctcctcc
tcagccgtctcctgcagcacggcatga
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