Alosa sapidissima (American shad): 121720396
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Entry
121720396 CDS
T11137
Symbol
cthrc1b
Name
(RefSeq) collagen triple helix repeat-containing protein 1 isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121720396 (cthrc1b)
Cilium and associated proteins [BR:
asad03037
]
Other cilia and associated proteins
Stereociliary proteins
121720396 (cthrc1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
121720396
NCBI-ProteinID:
XP_041962394
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Position
10:30464931..30480763
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AA seq
278 aa
AA seq
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MDLWTSVERNKVPYMYTFRIMNMVSPTTRLLIFSWLIFPLYEAEKMRHRGLRQKDAEYIE
KCTDGDSDKQNCTRQSDEAQTTHYKMYSGCVQGPAGIPGREGNPGVNGIPGTPGVPGRDG
AKGEKGECVSEIFEEPWKPNYKQCAWNSLNYGIDLGKIAECTFTKLRSDSALRVLFSGSL
RLKCKSACCQRWYFTFNGAECAGPLPIESIIYLDQGSPEINSTINIHRTTAVEGLCEGVR
SGLVDVAIWVGTCGDYPRGDASTGWNSVSRVIIEELPK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggacctctggacctccgtggagagaaacaaagttccttacatgtatacctttcggata
atgaatatggtgtctccaacgacgcgactattgattttctcctggttaatctttcctctt
tatgaagccgagaaaatgagacatagaggactccgtcagaaggatgcggaatacatcgaa
aaatgcactgacggcgactcagacaaacagaactgcaccagacaatcagatgaagcccaa
actacccactataaaatgtattccggctgtgtccaaggacctgcgggcattccaggccga
gaggggaatccaggtgtgaatggcattcctggaaccccaggtgtgccgggccgtgatggg
gcaaagggtgagaagggcgagtgtgtgagcgaaatctttgaggagccctggaaacccaac
tacaagcagtgcgcatggaattccctcaactatggcattgacctgggcaaaattgcagag
tgcacgttcaccaagctgcgctcggacagcgccctgcgcgtgctcttcagcggctccctg
aggctcaagtgcaagtcggcctgctgccagcgctggtacttcaccttcaacggggccgag
tgcgccggcccactgcccatcgagtccatcatctacctggaccagggcagccccgagatc
aactccaccatcaacatccaccggacaaccgcagttgaaggactgtgcgagggggtccgc
tccggcctggttgatgtcgccatatgggtgggcacctgcggcgactatccccgcggcgac
gcctcgacaggatggaactccgtttccagggtgatcatcgaggaactgcctaaataa
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