Alosa sapidissima (American shad): 121720444
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Entry
121720444 CDS
T11137
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121720444 (taf12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asad03021
]
121720444 (taf12)
03036 Chromosome and associated proteins [BR:
asad03036
]
121720444 (taf12)
Transcription machinery [BR:
asad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121720444 (taf12)
Coactivators
SAGA/TFTC/STAGA complex
121720444 (taf12)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121720444 (taf12)
STAGA complex
121720444 (taf12)
TFTC complex
121720444 (taf12)
SAGA complex
121720444 (taf12)
SLIK complex
121720444 (taf12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
TFIID-31kDa
TAF4
CENP-T_C
TAF10
Tic110
Motif
Other DBs
NCBI-GeneID:
121720444
NCBI-ProteinID:
XP_041962464
LinkDB
All DBs
Position
10:complement(17262152..17265389)
Genome browser
AA seq
132 aa
AA seq
DB search
MANNTNAPGKVLGTPGPAGRLSPEGSQVLSKKKLQDLVREIDPNEQLDEDVEEMLLQIAD
DFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSDEIRPYKKACTTEAHK
QRMALIRKTTKK
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaataccaacgcacctgggaaggtcctgggcacacctggacccgctggaaga
cttagtcctgagggaagccaggtcctgagtaagaagaaactccaggatctggtccgggaa
attgacccaaatgagcagcttgatgaggatgtggaggagatgctgcttcagatcgctgac
gacttcattgagagcgtggtgaccgctgcctgtcagttggctcgccacaggaagtccagc
accctggaagtgaaggacgtccagctacaccttgagcgccagtggaacatgtggatccca
ggctttggctccgatgagatccgcccgtataagaaggcttgcaccacagaagcccacaaa
cagagaatggcactgatccgcaaaacgaccaaaaagtag
DBGET
integrated database retrieval system
