Alosa sapidissima (American shad): 121720534
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Entry
121720534 CDS
T11137
Symbol
kcnn3
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121720534 (kcnn3)
Ion channels [BR:
asad04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121720534 (kcnn3)
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF6775
DUF7310
Motif
Other DBs
NCBI-GeneID:
121720534
NCBI-ProteinID:
XP_041962703
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Position
10:35813805..35887421
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AA seq
802 aa
AA seq
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MDPPPSLSQALLGGSEDEDQQQQRPPLPCAGTAHPAITGSYPGTNHSNHMGGNSSLERLN
TTPSPTTPGGALPPASLPRLPLVTSSSSGLAAATTTTPPQLPAPIPNALHPTSTPLSSCL
GSQHSLSADASPVYNALFYSSHSPTTERERERGCKHRQASPLVHRRDSNPFTEIAMSSCK
YTGGVMKPLSRLSASRRNLIESDSSSDTKEGGGSGASPAPSSIPTGAVPPSSSSHPSQLG
QSQNPPEIVISSKEDTPYRAHAYEMSIYHQNHALSESRAAIGAGVGTNGRRGGTVTGRTI
SKAQKRKNQNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGVYNKSSMY
SLALKCLISLSTVILLGLIIAYHAREVQLFVIDNGADDWRIAMTMERVLLIALELLVSAV
HPVPGDFKFQWRARLAFSYAPSQAEADLDMVLSVPMFLRLYLIARVMLLHSKLFTDASSR
SIGALNKVHFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDAQDVTSNFL
GAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHV
HNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLAKKIDHARVRKHQRKFLQAIHQLRSVK
MEQRKLSDQANTLVDLSKMQSVMYELMSELNDRSEDLERQMLSLEQRVEQLTAGFSALPA
HLSATLAAQHNALLMLLRERDTKLLSPPMPLAPAPPMPHANANAQTNATAVATATTAIAA
APSSAAQGGEADDSPNTTASSC
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggatccccctccctccctgagtcaagccctgctgggtgggagtgaggatgaggaccag
cagcagcagcgcccccccctgccttgcgctggtacagcccaccccgccatcacgggcagc
tacccaggaacgaaccactccaatcacatggggggaaacagcagcctggagaggctcaac
accacgccttcgcccacaacgcccggcggcgccctgcccccagcatccctgccacgcttg
cccctggtgacctcgtcctcgtcagggctcgccgctgccacaacgacgaccccaccccaa
ctgccggcgcccatcccgaacgcgctgcacccgaccagcactccgctgtcgtcgtgtctg
ggcagccagcacagcctgagcgccgacgcctcgcccgtgtacaacgccctcttctactcg
tcgcactcgcccacgaccgagcgcgaacgtgagcgcggctgtaagcacaggcaggccagc
ccgctggtccaccggcgcgacagcaaccccttcaccgagatcgccatgagctcctgcaag
tacacgggcggcgtcatgaagccgctgagccgcctgagcgcctcgcggcgcaacctcatc
gagtcggacagcagcagcgacaccaaagagggcggcggctccggggctagtcccgcccct
tcctccatccccaccggggccgtcccaccctcctcttcctcccacccctcccagctcggc
caatcgcagaacccgcccgagatagtcatctcctccaaagaggacacgccctacagggcg
cacgcctatgagatgtcaatctaccaccagaaccacgccctctcagagagcagggccgct
attggtgcaggggtcgggactaatgggcggagaggagggactgtgaccggcagaaccatc
tccaaggcgcagaagcgcaagaaccagaacatcggctacaagctgggccaccggagggcg
ctgttcgagaagcgcaagcgactcagtgactatgcgctcatcttcgggatgttcgggata
gtcgtcatggtgatcgagacggagctctcctggggagtctacaataagagctccatgtat
tccctggcacttaagtgcctcatcagtctgtccactgttattcttctgggactcatcatt
gcctaccatgcgagagaagtgcagctcttcgtcatcgacaacggagcggacgactggcgc
atcgccatgacgatggagcgcgtcctgctgatcgctctggagctgctggtgtcggccgtg
cacccggtgcccggcgacttcaagttccagtggcgggcgcggctggccttctcgtatgcg
ccgtcgcaggccgaggccgacctggacatggtgctgtccgtgcccatgttcctgcggctc
tacctcatcgcccgcgtcatgctcctgcacagcaagctcttcaccgacgcctcctcccgc
agcatcggggcgctcaacaaggtgcacttcaacacacggtttgtgatgaagactctgatg
accatctgtccaggaaccgtgctgttggtgttcagcatttcactgtggatcatcgccgct
tggaccgtacgagtgtgtgagagataccatgatgcccaggacgtcacgagtaacttcctg
ggggcgatgtggctgatctccatcaccttcctgtccatcggctacggggacatggtgccc
cacacatactgtggcaaaggcgtgtgtctgctcacgggcatcatgggggcaggctgtacg
gcactggtggttgccgtggtagcgcggaagctggagctgaccaaggcggaaaagcatgtg
cacaatttcatgatggacacgcagctcacaaagaggataaagaacgcggcggctaacgtg
ctgagggagacatggctcatctacaaacacaccaagctcgcgaagaagattgaccacgcc
agggtccgcaagcaccagaggaagttcctgcaggccatccaccagcttcgcagtgtgaaa
atggaacaacgcaagctaagtgatcaagccaacactttggtggacctctcaaagatgcag
agcgtcatgtatgagctgatgtcggagctgaatgaccgcagcgaggacctggagcgccag
atgctgagcctggagcagcgggtggagcagctgacggcaggcttcagcgcgctgcccgct
cacctgtcggccacgctggccgcccagcacaacgccctgctgatgctgctgcgggagcgc
gacaccaagctgctctcgccacccatgcccctcgcgcccgcgccgccaatgccccacgcc
aatgccaacgcccagaccaacgccacggccgtcgccacggccaccactgccatcgcggcc
gctcccagcagcgcagcacagggcggtgaggccgacgacagccccaacaccaccgcctcc
agctgctga
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