Alosa sapidissima (American shad): 121720641
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Entry
121720641 CDS
T11137
Name
(RefSeq) transcription factor E2F3-like
KO
K06620
transcription factor E2F3
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04110
Cell cycle
asad04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121720641
04218 Cellular senescence
121720641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121720641
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
121720641
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Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
DUF5312
Motif
Other DBs
NCBI-GeneID:
121720641
NCBI-ProteinID:
XP_041962896
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Position
10:26771588..26781717
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AA seq
424 aa
AA seq
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MRRGITSATEKVIITGVGGSSLDKNVVLTALSDRLTSTLPTTTYIHIITPPPNISQTSSI
CLSEPANGNLYSTPHGASLGAGQRPTLGRPPAKRRLALDDSDQLSSTQLGSTPKGRDGPS
LANVRPCKTPKSPADKEKSRYDTSLGLLTKKFLQLLSQSPDGVVDLNWAAETLSVQKRRL
YDITNVLEGVHLVKKKSKNNIQWMGCNLSEAGGVGNQRQALSSELARLHQEELRLDQLIT
SCTQDAKLMTEAPANQKLAYVTYEDLRRLSGLKDQTVIVVKAPPDTKLEVPDPEQNLQVH
LTSTKGPIDVFLCPEESETDSPIKDGGQSSASTTFMKVSDDGDKRCSSPAVAVTNLSPID
SPFTSLLLQTEDQNPAASDLSFLSLSPPLLQDDYLLDPDEIVGISDLFDTNNLDKLPLDY
LLCN
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagaagagggataacatcagccacggagaaagtaattattacaggagttggtggctct
tcgctcgataaaaacgtagttttgacagcattatccgatcggttaacatcaactcttccc
actaccacgtatatacatattataaccccgccgcccaacatttctcaaacctcaagtatc
tgcttgtctgaacctgcaaatggcaatttgtactccactccccacggagcttcacttgga
gcaggacagcgaccaactttaggacgtccaccggcgaagaggcggctggcgttggatgat
tcggatcagctctcttccactcagctgggatcgactcctaagggcagagatggcccctct
ctggccaacgtcagaccctgcaaaactccaaagtctccggctgataaggagaagtcgcgg
tacgacacgtccctgggtctcctgaccaagaagttcctgcagctgctgagccagtcgcca
gacggcgtggtggacttgaactgggccgccgagacgctcagtgtccagaagaggcgtctc
tacgacatcacaaatgtcctggagggcgtgcacctcgtcaagaagaagtccaaaaacaac
attcagtggatgggttgcaacctgtcggaggcagggggcgttgggaaccagcggcaggcc
ctgagcagcgagctggcccgactgcatcaggaggagctacggctggaccagctcatcacc
agctgcacccaggacgccaagctcatgaccgaggcccccgccaaccagaagctggcctat
gtgacgtatgaagatctgcggcgcttaagtggtctgaaggatcagactgtcatcgtggtg
aaggcgccgcccgacaccaagctcgaggtgcctgacccagagcagaatttacaggtccac
ttgaccagcactaagggccccatcgatgtcttcctgtgcccggaggaaagtgagacagac
agccctatcaaagatggcggccaaagtagcgcttccacaacattcatgaaggtgtcagat
gacggtgacaaaaggtgctcatccccagcagtggcagtgaccaacctatcccccatcgac
tcacccttcaccagcctcctactgcagacggaggaccagaacccagctgcctcggacctt
tccttcctcagcctttcccccccactgctccaggatgactacctgcttgaccccgacgag
atcgttggcatcagtgacctcttcgacaccaacaacctggacaagctgcccctggactac
ctgctgtgcaactga
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