Alosa sapidissima (American shad): 121720766
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Entry
121720766 CDS
T11137
Name
(RefSeq) glutamate receptor ionotropic, kainate 3
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121720766
04082 Neuroactive ligand signaling
121720766
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121720766
Ion channels [BR:
asad04040
]
Ligand-gated channels
Glutamate (ionotropic)
121720766
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
121720766
NCBI-ProteinID:
XP_041963108
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Position
10:17989251..18097429
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AA seq
1035 aa
AA seq
DB search
MRNTWLSHRGAIVEYWTTGIVCLFWIQCSFGMPHVIRIGGIFEQTESAPNAPVSSEELAF
KFAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNA
VQSICNALEVPHIQVRWKHHPMDNRDTFYANLYPDYSSLSYAILDLVQFLRWKTATVVYD
DSTGLIRLQELIMAPSRYNIRLKIRQLPLDNTDTRPLLKEMKRGREFRIIFDCSHAMAAQ
ILKQAQMMGMMTEYYHYIFTTLDLMAIDLEPYRFCGVNMTGFRILNVDNPQVASIVEKWS
LERQILPKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGR
FMSFIKESHWDGLTGRLCFNKTTGLRTDFDLDIVSLKEEGLEKVGKWSASGGLNITEVPR
RNGMNITDSLSNRSLVITTILEEPYVMLKKSDRALVGNDRFEGFCIDLLKELAAILGFSY
EIRLVPDGKYGSQDDKGQWNGLIRELMEHKADLAVAPLTITYLREKVVDFSKPFLNMGIS
ILYRKPNNTNNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGS
DVVENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFL
TVERMDSPVDSADDLAKQTKIEYGVVRDGATMTFFKRSRVSTFEKMWAFMSSRQSTSLVK
SIEDGIQRVLKSDYALLMESTTIDYVTRRNCNLTKVGGIIDSKGYGIGTPKGSPYRDKVS
IAILSIMEDGRLHMLKEKWWNGDHCQQETRYEAGPMSIQNLGGIFIVLASGLVLSVFVAI
GEFVYKLRKTAEREQVFLQCGGGRDQTVVHLREAREAQASPAAGLPPAVAAATVAGAAHG
EDGRGDQHAHLQRPSPAGKGQPELQRRDDARVSMTCLGDGHLRHVPGAAAGDARDYGTLP
EGFATFTLSRRDLRNHHPTTTMTQTMTTAMHASQNGGSGAGGGTATVNHASTTDHILKPL
YPTREREGGRSVSFL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatacttggttgtcacatcgaggtgcgattgtggaatactggacaacgggcatt
gtgtgtcttttttggattcagtgttcattcgggatgcctcacgtcattcgaatagggggc
atttttgagcaaacagaaagcgcccccaacgcccctgtgagttcagaggagctggccttt
aagttcgccgtcaacaacatcaacaggaacaggacgttactacccaacacaacattaacg
tacgacatccagaggataaacatctacgacagttttgaggcgtccaggaaagcctgtgac
cagctctctctaggcgtagtagccatctttggcccgtcacacagctcatcctccaacgct
gtccagtccatctgcaatgctctggaggtgccacacatccaggtgaggtggaagcaccac
cccatggacaaccgggacacattctacgccaacctgtaccccgactactcctcgctcagc
tacgccattctcgaccttgtgcagttcctcaggtggaagacggccaccgtggtgtacgac
gacagcacaggcctcattagactacaggagctgatcatggccccatccaggtacaacatc
cggctgaagatcagacagcttcccctggacaacacggacacgcggccgctgctgaaggag
atgaagcgaggccgcgagttccgcatcatcttcgactgcagtcacgccatggctgcccag
atcttgaagcaggctcagatgatgggaatgatgacagagtactaccactacatcttcacc
actctggacctcatggccatcgacttggagccctaccgcttctgcggcgtgaacatgacc
ggcttccgcatcctgaatgtggacaacccccaggtggcctccatcgtggagaagtggtcc
ctggagagacagatcctccccaagccagactcgggccttctggagggcatcatgacgaca
gatgctgctctgacgtatgatgccgtccacatcgtgtcggtgtcgtaccagcacgcgcca
cagatgaccgtcaactcgctgcagtgccaccggcacaagccctggaggttcggaggacgc
ttcatgagcttcatcaaggagtcgcactgggatggcctaaccgggcgattgtgctttaac
aaaaccaccggcctgcgcactgactttgacctggacattgtcagcctgaaggaggaagga
ctcgagaaggtgggcaagtggagtgcatcaggggggctcaacatcactgaggtccccagg
cgtaatgggatgaacatcaccgactcactctccaaccgctcgctggtcatcaccaccatc
ctggaggagccatacgtcatgcttaagaagtctgacagggcgctggtcggcaacgaccgc
ttcgagggcttctgcatcgacctgctcaaggagctggccgccatcctgggcttctcctac
gagatccgcctggtgccggacggcaagtacggctcgcaggacgacaagggccagtggaac
ggcctgatccgggaactaatggagcataaagctgacctggccgtggcccccctcaccatc
acctacctgcgggagaaggttgtggatttctccaagcccttcctcaacatgggcatcagc
attctgtaccgcaagcccaacaacaccaacaacggcttcttctccttcctcaaccccatg
acgcccgacatctgggtctacatcctgctggcctacctgggcgtcagctgcgtcttattt
gtcatcgccaggttcagtccatacgagtggtacgatgcccacccctgcaaccctgggtct
gacgtggtggagaacaacttcaccctactcaacagcttctggttcggtgtcggctccctc
atgcagcaaggctcagagctgatgcccaaagccctgtctacaaggatcattggtggcatc
tggtggttcttcaccctcatcattatctcctcatacacggccaacctggctgccttcctc
accgtggagcgcatggactcgcctgtagactcggccgacgacctggccaagcagaccaag
atcgagtacggcgtggtgcgggatggagccaccatgactttctttaagaggtccagggtg
tccaccttcgagaagatgtgggcgttcatgagcagccggcagagcacttcgctggtcaaa
tccatcgaggacggcatccagcgggtcctgaagtccgactacgccctgctgatggagtcc
accaccatagactacgtcacccgccggaactgcaacctcaccaaagtgggaggcatcatc
gacagcaaaggctatggcatcggcacgcccaagggctcgccgtaccgtgacaaagtgagc
atcgccatcttgagtatcatggaggatgggcgtctgcacatgctgaaggagaagtggtgg
aacggggaccactgtcaacaggagacccgctacgaggccgggcccatgagcatccagaac
ctgggcggcatcttcatcgtgctggcctcgggcctggtgctgtccgtcttcgtggccatc
ggcgagttcgtctacaagctaaggaagacagcggagagggagcaggtctttctgcaatgc
ggtggtggacgagatcagactgtcgttcacctgcgagaggcgcgtgaagcacaagcctca
ccagccgctggcctccctcccgctgtcgccgccgccaccgtcgctggggccgctcacggt
gaagacggacgcggtgatcaacatgcacacctacaacgaccgtcgcctgccgggaaagga
cagcctgagctgcagcgccgggatgacgcccgtgtttccatgacgtgcctgggggacggg
cacctgcggcacgtgcccggagcagcggccggcgacgccagggactacggcacgctgccg
gagggcttcgccacgttcacgctcagccgcagagacctacgaaaccaccacccgacgacc
acaatgacgcagaccatgacgacggcgatgcacgccagccagaacggaggcagcggcgcc
ggtggcggcaccgccaccgtcaaccacgcaagcaccaccgaccacatcctcaagccactc
taccccacccgcgagagagagggaggacgctccgtgtcctttctgtga
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