Alosa sapidissima (American shad): 121720850
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Entry
121720850 CDS
T11137
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121720850 (prdm13)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121720850 (prdm13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf-C2H2_15
zf-BED
GPS2_interact
Zf-C2H2_ZNF451
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
121720850
NCBI-ProteinID:
XP_041963250
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Position
10:complement(25663937..25669884)
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AA seq
618 aa
AA seq
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MQANRTPAISVFADCTIPAGIRIGPVPGIFKLGKYVSDRKEVGLKKKIRLVRGDFVDESG
SPLPDWIALIRAARNSQEQNLEAISDLPGGQIFYRVLREIQTGEELSVWYSNTLAQWFDI
PTTATPTHDEKGEERFICWYCWRIFKYPNTLKAHVHFHCALSNGRGFVNNEQARGSENLS
RSPKSGDIPNTSSSPRNGHHTSISDSIKRNMPSSPFLNKAGISKKSTSEEQDRALDMSVT
SARNHLLGLSGTSAVLSNMGFHPGVRSAFKPMGLSKVTPTEVSREESTGKPNSIGFNKLL
GGMKSTRSLNEPVSGAHPSKCVHPIDSTSPVVPCANTIRGFPLLPHFEETSAFKHVEGRM
HSGLSPSRYTQISSGFHFERFSLPQFEGVKPYNADCNIPLMPFTVYNGELLYSSPYYPFK
FHFSNLLKYPESVSYFGAPGLNPDLSSITNIDREIAMHTQQLSEIAVEKNRARLESMPAA
NAGTGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCFRPFGDPSNLNKHIRL
HAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQTIKKTDDKIDDMYEDPEQKSDNDSDV
DVCFTDDQSDQESSKNND
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaacaggacacccgcaattagcgtgtttgctgactgcaccatcccggccggc
atcaggataggaccggtgccgggtattttcaagctagggaagtacgtgtcggaccgcaaa
gaagttggactcaagaaaaagattcgcttggtgagaggggattttgtggatgaatcgggc
agccctctgccggactggatcgcgctcatccgtgcagccagaaacagccaggagcaaaat
cttgaggccatttcagacttacctggaggacagattttctatcgtgtgctgagggagatc
cagacaggagaagaattaagcgtatggtactcaaacacacttgcgcagtggtttgatatt
cccacgaccgctactccaacacacgacgagaaaggggaggaacgttttatctgttggtac
tgttggagaatcttcaaatacccaaacacgctcaaagcccatgttcatttccactgcgct
ctgagcaacggcagaggatttgtaaacaacgaacaagcaagggggtctgaaaaccttagc
aggtcacccaaatcaggagacatccccaacacctcatcctcgcccaggaacggccaccac
acctctatctccgactccatcaagcgaaacatgccttcctctcctttcctcaacaaggcg
ggaatatcaaagaagtccacatctgaggagcaggacagggccctcgatatgagtgtgacc
tcggccagaaaccatctccttggcctgagcggaacctctgcggtactgagtaacatgggt
ttccaccctggagtacgctcagcatttaaacctatgggactgtctaaggtcactccaaca
gaggtgtccagagaggagtccaccgggaaaccgaacagcattgggttcaataagcttttg
gggggaatgaagtcgacacgttcactgaacgaaccggtatctggagctcatccctccaag
tgcgtccaccccattgactccacatcccccgtggtgccctgtgccaacactatccgaggc
tttcccttgctgccgcactttgaggagacctccgctttcaagcacgtggaggggcgcatg
cactcggggctttcgccctctcgctacactcagatctcctctgggtttcattttgaacgt
ttttccttgccgcagtttgaaggggtgaaaccttacaatgcagactgtaacatcccactg
atgccattcactgtgtacaatggcgagttactgtatagctcaccttactacccatttaag
tttcacttcagcaatctcctcaagtacccggagtcagtttcctactttggcgcccctgga
ctgaaccccgatctgagctcaattactaatattgacagggaaatagccatgcatacacaa
cagctttctgagatagctgtggagaagaaccgggcaaggctcgagtccatgcccgcagcc
aacgctggtaccgggaagcccaaaaagggacacctttgtctgtactgcggtaaactgtac
tcacggaaatacggcctgaaaatccacatgaggactcacacgggttacaaaccgttaaag
tgcaaagtgtgcttccgacctttcggtgaccccagcaatttgaacaaacacatccgactg
cacgcagaggggaacacgccgtacaggtgcgagttctgcgggaaggtattggtgcgcagg
agggatttggagagacacgtcaaatcaaggcatccaggacaaaccatcaaaaagaccgat
gataagatagatgacatgtacgaagatccggagcaaaagagcgacaatgacagtgatgtt
gatgtttgcttcacggacgatcaaagcgaccaagagtccagcaaaaataatgattga
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