Alosa sapidissima (American shad): 121720905
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Entry
121720905 CDS
T11137
Symbol
jph1b
Name
(RefSeq) junctophilin-1b
KO
K19530
junctophilin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
121720905 (jph1b)
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Motif
Pfam:
MORN
Ring_hydroxyl_A
Flp1_like
Motif
Other DBs
NCBI-GeneID:
121720905
NCBI-ProteinID:
XP_041963317
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Position
1:complement(31956078..31969244)
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AA seq
662 aa
AA seq
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MTGGRFDFDDGGTYCGGWEDGKAHGHGICTGPKGQGEYSGSWSNGFEVVGVYTWPSGNTY
QGYWAQGKRHGLGVESKGRWLYRGEWAHGFKGRYGVRQSLNTPARYEGTWSNGLQDGYGV
ETYGDGGTFQGQWMGGMRHGYGVRQSVPYGMATVIRSPLRTSLASLRSEQSNGSVLHEQL
SDSPAGTRGGFVLNFHSDSELGGSGKKKGLFRRGSLFGSLRQLRKSDSRSSISSKRSSAR
SDATMSRISSSDANSTISFGEGDVADDYLPSEDHVDATTTEAYMGEWKSDKRNGFGVSER
SNGMKYEGEWTNNKRHGYGCTIFPDGTKEEGKYKNNVLVRGIKKQLIPLKNTKTRQKVDR
AVEGAIRAAAIARTKVEIATSRTAHARAKAEAADQAALLANQDSDIARAVARELSPNFHQ
PGPDYIKQRFNEPVEIKEVPEEKKEKSPSGSPHFYRKGTTPTHTPIHSPGPTPPPSPPPP
TKKKSFFSRKQDNKTPTTETAVTGITKAASKISVKQETALEVAPPPKPAKLAAPVANAHS
SPGNGELHSEYHGYKVKAEVMIPPDPPEEEMEMQVEEPPTPPPMRQYRAPTPKPMALRES
KPEPKLKKQESLKPKSLSETKKASLEITTDSVEQESGPNSVLVILVMLINVGLAIIFVHF
LT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcggacggtttgacttcgacgatggcggcacatattgcggtggttgggaggat
ggaaaagcccacggacacggtatctgcacgggccccaagggccagggcgaatactccggg
tcctggtctaacggcttcgaggtagttggcgtgtacacctggccaagtggaaatacgtat
cagggctactgggcgcaagggaaacgccacgggcttggcgttgagtcgaaagggaggtgg
ctctatcgtggagagtgggctcatggatttaaggggcgatacggggtcagacaaagccta
aatacacctgctagatatgaaggcacatggagtaatggtctgcaggatggatatggggtt
gagacctacggtgatggtgggacgttccagggccagtggatgggcggcatgcgtcatggc
tacggcgtgcggcagagcgtgccttacggcatggccacggtgatccgctcgccgctgcgg
acatccctggcctcgctgcgcagcgaacagagcaacggctcggtgctccacgagcagctc
tccgacagcccggcggggacgcgcggcggcttcgtcctcaacttccacagcgacagcgag
ctgggcggctcgggcaagaagaagggcctgttccggcgcggctcgctcttcggcagcctg
cggcagctgcgcaagtccgactcgcgctcgtccatctccagcaagcgcagctcggcgcgc
agcgacgccaccatgagccgcatcagctccagcgacgccaactccaccatcagcttcggc
gaaggcgacgtagccgacgactacctgccgtctgaggaccacgttgacgccaccaccacc
gaggcctacatgggcgagtggaagagcgacaagcgcaacggcttcggcgtcagcgagcgc
tccaacggcatgaagtatgagggcgagtggacgaacaacaagcgccacggctacgggtgc
acgatattccccgacggcaccaaggaggaagggaagtacaaaaataacgttctggtgcgg
ggcatcaagaagcagctcattccactcaagaacaccaagacgaggcagaaggtcgaccgc
gccgtggagggagccatccgggcagctgccatcgccaggactaaagtggaaatagccacc
tcaaggacggcacatgccagggccaaggctgaggctgctgaccaggctgcactgctggcc
aaccaggactcagacattgcccgggcagtggctcgcgagctgtcccccaacttccatcaa
ccaggccccgactacatcaaacagaggtttaatgagccagtggagattaaggaggtccca
gaggagaagaaggagaagtccccgtcgggaagccctcacttctaccgcaaagggacaacc
cccacccacaccccaattcacagcccgggacccacgcctcccccctccccgcctcccccc
accaaaaagaagtcctttttcagtcgaaaacaagacaataagacgcccactacggagacc
gcagtcacgggcatcacgaaggccgcctccaagatatcagtaaagcaggaaacagctctg
gaggttgctccaccacccaagcctgccaagttagcggcgccggtcgccaatgcccacagc
agccccggaaacggcgagctgcactcggagtaccacggctacaaggtcaaggccgaagta
atgatcccaccggacccaccagaggaggagatggagatgcaggtggaggagcccccaaca
ccaccccccatgaggcaatacagagcacccacccccaaacccatggccctcagagagagc
aaacctgagccaaaactcaagaagcaggagtcgttgaagccaaagagcctatctgaaacc
aagaaagccagcctggagattaccaccgacagtgtcgaacaagaatcgggccctaattca
gttctggttatccttgtgatgcttataaatgttggtttagctattattttcgtccatttc
ctaacctga
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