Alosa sapidissima (American shad): 121721092
Help
Entry
121721092 CDS
T11137
Symbol
ice1
Name
(RefSeq) little elongation complex subunit 1 isoform X1
KO
K26143
little elongation complex subunit 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asad03021
]
121721092 (ice1)
Transcription machinery [BR:
asad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Little elongation complex (LEC)
121721092 (ice1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
PRKG1_interact
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
121721092
NCBI-ProteinID:
XP_041963642
LinkDB
All DBs
Position
10:complement(28646780..28659377)
Genome browser
AA seq
1532 aa
AA seq
DB search
MMPGETQARTAGVAPDGTAGTCQNCAVLNETLHEYMTSFLALKQKIIETDKVLNEFKDKC
DELQKTQRENADLHSHLDELLLNVAPFDSLHKEDVYMQEELQRTKGFLKQCQDGPADLRN
RDPEAQTLKDRIIFQLKILQDSNLKQSAVVTSLQNENESLENKLQQTQEKLQKLEKEINK
EKKSSGTQTERKELCSTVVQTETAERSSTAVQTNPTHTASVLVQTDPTEESMMDLRKIRE
LVTGLWQCMLPQSLSEMPPQLGSLTCHSPLVRPVSPAGVPVPKERLHMSPVPLSPANVPR
TPVRTPARPAVRTPARPAAPCGKAPLPAEEVLDLFRWLPPLLSPIPSPVLQRSNVEEDLQ
LSDEEDEEELQTFKQEDVKEAAFLANGLKTNGQLRSPESPPEVKFHQTSLSDTHGQTTDR
KSEAVCLRMSVNGKSRRTAAPVPASLGSPGEREGHGEEMASVDDVMESEVVRDVVIPSAE
ACGDGTADMEWDPTSVDGLEGVHTDPAVGSGTEPYHSSGFGVTNGVGLLETKEDNTELKD
SPLRNGPATLKPVDDSEMIVCNVELHEEQISFIQPPLTDFASTPKPQVKDQIVRISKKCT
GEALGSESLNGIQNARDLNQNEVQNTASSGVGQNGQCPNHHGPVNSRIRREQKQNSSSHT
PDVGNTALRDECQNGQHQTSTDVRSNADLSKGTCGARRGKPSVDVCGDIESSEDYRTPQR
KVRVAHSRRESQQPAESINGTSVEGGSKEKPSKDLTCGTDTQTPSSPVARGGVHVWCVDE
DVDLATNKNTERSRVSRGDTTTNSIDAPPALQSQEDPQPEVEEQMQEHPQRTQENSNGHM
QEEDARVPDVQSPDRPVITNGTATLKHSADGVVHTNGFGGSHCASEDEGSYTRVKGLLES
LQPVSTASLISPRESVRNIRSMMGPPLRPLLPPLMSTPPKPGRLDPCGLAASPDGSEGAA
AMPSANLALRNGPQKISFSPATTTATATPTTPSPCKSVHSSPLQFGSATPKHAVPVPCRH
PAPLNPASPATPAQAQENSMQMLDSMYPELSAQARTLNILRGNVCNLVRPGPAPAPEPST
PPQAPGSHAASGFNSVTTAFTKTQQAGKRSGTNVLLPKSAKKLRLGNSPVTVSARPPSDL
AIEPLPTDRESKEPQTPNGLHVVKNERIAPLDNAGSSKECVISQALAKLGSSCFDLLVVV
KSHVFVLQRISSVPILRDEEKELVSDFCTTHKSLTEDFLSAILAQLKAERTTLGGDHLQS
LCRVYTALCRQNKDRLKANTLAYSLLKEDFPDAAKHLLFMVTTWPSLLTRESTLCRAIHS
VARIRAQGDILSCLNAYLHWDSNPPCDIPQLINSTLMALRTGENMQFQPHSRHGDDLCPT
SWEYIFTLDLLCAHQKWKWTHDNIIRNDLWPIMNAWVTQPRTPKGPIQDVTVAAVLRLIG
RLGQQGIKEKYSAAVRKMASVINMLGKQGQAEGVLWEVQLAAAYAIYDLSPSNPKEALAA
LAEWRGEATGPVPPGITSCLTQISSLSRKVSS
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccggagagactcaggcgagaaccgcaggagttgctccagacggaacggctgga
acttgtcaaaactgcgctgtgttgaatgagacactgcacgaatacatgacatcgtttttg
gcactaaagcagaagatcatcgaaacagataaagtattgaacgagttcaaagacaaatgc
gatgagcttcagaaaacgcagagggaaaatgctgacctccacagtcacctagatgagttg
ctcctgaacgtggctccttttgatagcctacacaaggaagatgtgtatatgcaagaggaa
ctgcagaggacaaagggttttctgaagcaatgccaagatggaccagcagacctgaggaac
agggaccctgaggcccagactttgaaggacagaattatttttcaactcaaaattctacaa
gactcaaatctcaagcagagtgctgttgtcacctcgctccaaaatgaaaatgaatccttg
gagaataaactgcagcaaacacaagaaaagctgcaaaaactggaaaaagaaataaacaaa
gaaaagaagagctctggaacacaaaccgaaaggaaagagctatgcagcacagtggtgcag
acagagaccgcagagaggagcagcacagccgtgcagacaaaccccacacacacggccagt
gtgctggtgcagaccgaccctacggaggagagcatgatggatctacgcaaaataagggag
ctggtgaccggcctttggcagtgtatgctgccccaatcactgtccgaaatgcctccccag
ctaggatccttgacatgtcactctcctttggttcgaccagttagtccggctggggttcca
gtgcctaaggaacgtcttcacatgtcacctgtacctctgtctcctgccaatgtgccaaga
acccctgtccgaactcctgccaggccagctgtccgaacccctgccaggccagctgccccc
tgtgggaaagcccctttgccagcggaggaggttttggacttgttcagatggctgccccct
ctgctctcacctattcccagccctgtccttcagaggagtaacgtggaggaagacttgcag
ttatcagacgaggaggacgaggaagagctccagacattcaagcaggaagacgtgaaggag
gccgcattcctcgcgaacggcctcaagacgaacggtcagctccgctctcctgagtccccg
cctgaggtcaagttccatcagacctccctctccgacacacacggacaaaccacagaccgg
aaaagcgaggctgtctgtctccgcatgtccgttaacggaaagagcagaaggactgcggct
cctgtgccggcgagccttgggtcccctggtgagcgagaaggacatggggaagagatggcg
agcgttgatgatgtcatggagtctgaggtggtcagggatgtggtgattccttcagcggag
gcgtgtggtgatggcactgctgatatggagtgggaccccacttcagtggacggcctggaa
ggtgttcacactgaccctgctgttgggtccggcacagaaccatatcacagctctgggttt
ggagttacaaatggggtcggactcttggagaccaaagaggataacactgaactcaaagac
agtcctctgagaaatggccctgctactcttaagcctgtagacgactcagagatgattgtg
tgcaatgttgagctgcatgaggagcaaatatcatttatacaacctcctttgacggacttt
gcctcaactccgaaacctcaagtcaaagatcaaattgtgagaattagtaagaaatgcact
ggtgaggctctggggtcagagtcattgaatggaatacagaacgcccgtgatctgaaccag
aatgaggtccagaacactgcgtcctctggagtgggacagaatggacaatgtccgaatcat
catggcccagtgaattctagaatcagaagagaacagaagcagaattcctccagtcacact
cctgatgtggggaatacagctttgagagacgagtgtcagaatggacaacatcagacgtct
actgatgtgagaagcaacgcagacctgtctaagggcacgtgtggagctcgcagggggaaa
ccctcggtggatgtgtgtggggacatcgaatcctccgaggattaccgcactccgcagcgc
aaggtccgcgtagcccactcccggcgggagagccagcagcccgctgaaagcattaacggc
acctcggtggagggggggtcgaaagagaaaccctcaaaggatctcacatgtggtacagat
actcaaactccaagcagtccagtggcgcggggtggtgtgcatgtctggtgtgttgatgaa
gacgttgaccttgcgactaacaaaaacaccgaacggtcacgtgtgagccgtggagataca
acaacaaatagcattgatgctcctccagcgctgcagagtcaagaagacccacagcctgag
gtggaagagcagatgcaggagcatccacagcgtacacaagagaactccaatggacacatg
caagaggaggacgcacgtgtgcccgatgttcaatctccagacaggccggtcatcaccaat
ggcacagccacactcaagcattcagctgatggagtagtccatacaaatggctttggaggc
tcacattgtgcatcagaggacgagggcagctacaccagggtcaaaggcctgctggaatct
cttcagcctgtctctacagcgtccttaatctctcctagggagtcggtccgaaacattcgc
tcgatgatgggcccccctctccgccctctgcttcctcctctgatgtccacccctcccaag
cccggtagactggacccgtgtggactcgcagcgtcaccagatggctctgagggggctgcg
gcgatgccctccgctaacttggcactccggaacggcccgcagaagatctccttctccccc
gccaccaccaccgctaccgccaccccgacaaccccgtccccctgcaaaagcgtccactcc
tccccgctgcagttcggctcggccacgcccaaacacgccgtgccggtcccctgcaggcac
ccggcgccgctgaaccccgcgtctcccgccacgcccgcccaggcccaggagaactccatg
cagatgctggactccatgtacccggagctgtcggctcaggcgcggacgctcaacatcctg
cgcgggaacgtctgcaacctcgtccggcccggtcccgccccggctccggaacccagcacg
ccccctcaggcccccggcagccacgcggcgtccggcttcaactcggtgaccacggccttc
accaaaacccagcaggcgggcaagcggtccgggaccaacgtgcttttgccaaagagtgcc
aaaaagttacgcctaggcaactctcctgtgactgttagcgcaagaccgccgtcagacctc
gccatagagcccttaccgaccgacagggaatcgaaagagccacagacccctaacggcttg
cacgttgtaaagaatgaacggattgctccactggacaatgcaggaagcagcaaagaatgt
gttatttctcaggctctggctaaactgggaagctcttgctttgatttgctggtagtggtt
aaaagtcatgtcttcgtccttcaaaggatctcttctgtccccatactacgagatgaagag
aaggagttggtttccgatttctgcacaacacataagtctttgaccgaggacttcctgtca
gccattttggctcagctgaaggcagagaggacgactttgggtggggatcacctccagagc
ctctgtcgagtctataccgcactgtgccgccagaacaaagatcggctcaaggccaacacc
ctggcctatagtctcctgaaggaagacttcccggacgctgccaaacacctcctgttcatg
gtgaccacctggccgagcttgctgacccgtgagagcaccctgtgcagagccatccactcc
gtcgcccgcatacgggcgcagggagacatcctcagctgtctcaacgcctacctccactgg
gactcgaaccctccctgtgacatacctcagctgattaacagcacattgatggccctacgc
actggagagaacatgcagtttcagccccacagtcgccacggtgacgacctttgccccacg
tcgtgggagtacatcttcacccttgacctcctgtgtgcgcatcagaagtggaagtggacg
catgacaacatcatccgcaatgacctttggcccataatgaatgcgtgggtgacccagcca
cggacaccgaagggtcccatccaggacgtgactgtggccgcggttctccgactgatcggg
agactggggcagcagggcattaaggagaagtactcagctgccgtccgcaagatggcctcc
gtcatcaacatgctcggcaagcaaggacaggctgaaggggtgctgtgggaagtgcagtta
gcggcggcctatgccatatacgacctgtcacctagcaaccccaaagaggccttggcagcg
ctggcagagtggcgtggggaggcgacggggcctgtgccccccggaatcaccagctgccta
acgcagatctcctcactcagcaggaaggtctcgtcctga
DBGET
integrated database retrieval system
