Alosa sapidissima (American shad): 121721114
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Entry
121721114 CDS
T11137
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121721114 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121721114 (trip13)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
121721114 (trip13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_25
AAA_18
AAA_14
Viral_helicase1
AAA_24
TIP49
AAA_5
NPHP3_N
ATPase_2
NACHT
TsaE
RNA_helicase
AAA_RNF213_4
AAA_28
ABC_tran
bpMoxR
Cytidylate_kin
RuvB_N
ATPase
AAA_33
IstB_IS21
AAA_7
AAA_11
AAA_17
AAA_30
DUF815
SLFN-g3_helicase
Rad17
AAA_19
Mg_chelatase
NB-ARC
PduV-EutP
AAA_3
nSTAND1
Sigma54_activat
nSTAND6
PhoH
NTPase_1
DUF6393
Motif
Other DBs
NCBI-GeneID:
121721114
NCBI-ProteinID:
XP_041963677
LinkDB
All DBs
Position
10:complement(6336482..6346978)
Genome browser
AA seq
436 aa
AA seq
DB search
MRLISVYMDGDRMEVVGEPQQNGNGISNTTIHVEVHVKLRSTAKKADIKMHTCGLLNRHR
MVFGNFRWTEFDEDFLKRNVESVAIVDAERQPIDLKSCNLSMHIFSLSDDGPSMLTLEED
EELSAANSWLLPAAEFHGIWESLIYDSGVKTQLLDYVSTTIFFSDKNVDSNLIAWNRVVL
LHGPPGTGKTSLCKALAQKLSIRLSNRYTYGQFVEINSHSLFSKWFSESGKLVTKMFQKI
QQLIDDKEALVFVLIDEVESLTAARNASQAGTEPSDAIRVVNSVLTQLDQIKRHPNVVIL
TTSNVTEKIDLAFVDRADIKQYIGPPSVEGIFNIYLSCLEELMKCQIIYPRQQLLTMFEL
QTMDFKESNVSQLSLALRTIAIKSKGLSGRALRKLPFLAHALFVKTPSTSLEGFLKALDK
AVDKQLEERTHLVNCV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttatatctgtatatatggatggtgatagaatggaggttgttggcgagcctcaa
caaaacggcaatggcattagcaatactaccatccatgtggaggtccatgtaaaattgaga
agtactgcaaagaaggctgacattaaaatgcacacgtgcggactgctgaatcgacaccgc
atggtatttgggaacttcagatggactgagtttgatgaagacttcctgaagaggaatgta
gagtcagtagccattgtggatgcagagagacagccaatagatttgaagagttgcaatctg
tcaatgcacattttctccctgagtgatgatggccccagcatgctcactttagaggaggac
gaggagctgtcagcagccaactcttggcttctaccagcagctgaattccatggcatctgg
gagagcctgatctacgatagtggagttaaaactcagcttctggactacgtctctacaacg
attttcttctccgacaaaaatgttgatagtaacctgattgcatggaacagagtggtttta
cttcatggacccccaggcacagggaagacgtcactgtgcaaagcgcttgcccagaagctc
tccatcagactgtcaaacaggtacacttatgggcaatttgtggagataaacagccacagt
cttttctccaagtggttttcagagagcgggaaactcgtcaccaagatgttccagaaaatc
caacagttgattgatgacaaagaagctcttgtttttgttttaatcgatgaggtggagagt
ttgacggcagcccgtaatgcgtcccaggccggcacggagccctcggacgccatccgcgtg
gtcaactctgtcctcacgcaactggaccagattaagcggcatcctaatgtggtgatcctc
acaacctccaatgttacagagaagatagacttggcctttgtggaccgtgctgatatcaaa
cagtacatcgggcctccctcagtggagggcatctttaacatctacctgtcctgtctggag
gagctcatgaagtgtcaaatcatttacccgcggcagcagctgctcaccatgtttgagctg
cagaccatggacttcaaggagagcaacgtgtcccagctgagtctggccctcaggaccata
gccataaagagcaaagggctcagtggcagagcattgaggaaacttccctttttggctcat
gccctgtttgtgaagacccccagtacttccctggaaggattcctgaaggctctggacaag
gctgtagacaaacagttagaggagcgaacacatctggttaactgtgtatga
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