Alosa sapidissima (American shad): 121721152
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Entry
121721152 CDS
T11137
Symbol
sall3a
Name
(RefSeq) sal-like protein 3
KO
K19871
sal-like protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121721152 (sall3a)
03036 Chromosome and associated proteins [BR:
asad03036
]
121721152 (sall3a)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121721152 (sall3a)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121721152 (sall3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2H2_11
IZUMO
zf-C2H2_6
TDBD
UBZ_FAAP20
zf-H2C2_5
zf-Di19
Motif
Other DBs
NCBI-GeneID:
121721152
NCBI-ProteinID:
XP_041963781
LinkDB
All DBs
Position
10:22438687..22455421
Genome browser
AA seq
1349 aa
AA seq
DB search
MSRRKQAKPQHLKSDEDPSVVGVISENVPGEVLEDADSGNESRSGSEETHVCEKCCAEFF
KWSDFCEHLKTCTKNPLVLIVNENEATPDPSLEYPGEPSPVPSCPSDPADSEEAGEGSQT
PAEGDDGAEMMLERGAATMEKDDEPMEVEMSPEKPAVDPEDQDASAEPDAPLPQIDDAVQ
PSGTGSYGMPSTNVTLETLQSTRVAVAQFSQSFRGGALAGGVSTMAIPMILDQLMALQQQ
QIHQLQLIEQIRNQVALMNRQPSSQPALGHHAPHHSTGSASQGVASSSCIPALPSQLQLH
NFITPPVHQLPVRVPATLNGPGPASLTSVLEGPLNHATQAGGPLASAGLSNSTSTNSSFP
PSSSNVVSSLLPPSTICNTSSISSSSAGALGGITSSVTLPRNSSSPPTLTHGSLLSSSSS
ISNMPLIPHSSSSSVIFPNPLASIAATANALDPLSAMMKHRKGKPPNVSVFDTKPSSDDP
FFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPH
IQMNPYPVPEYLDNVPTSSGIPYGMSLPPEKPVTTWLDSKPVLPTIPTSVGLQLPPTLPS
MMSGYGDSPSLTPLSRSPQRPSPPSSECASLSPNLLNSEASMSRTSESPRPNNTAGIDAS
PVLKPEGVHLPPNCTTRPGETTNSNTTSVTQVAISATVTMTTATTQNTNPTTPPTSTSHP
SLPMMSDQFKAKFPFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSAL
KMHYRIHTGERPFKCKICGRAFTTKGNLKTHFGVHRSKPPLRVQHSCPICQKKFTNAVVL
QQHIRMHMGGHIPNTPLPEGFQDMDTDLSFDEKSLDAMSNYDDDLIDEMEQAMEDEADLK
DGEIDPTKPLMHSSEMSPGSSPPTSVISSIAALENQMKMIDSTVNMTRSFRQKPMENGIG
FGGENDCFNHDSFSAGGDLENHSVGSPALSESSGSMQALSPTHSQSESHRSKSPGTTNNT
GAPAEEGQGQGQGQESGSATATVKSEKSETPSPASAAENNGALDLTATQPGRHFIKEEHQ
FSMLFLGRDRGFNSPGMVTAPNMIKLEMNGHSKPSSLSEGPHMPMGIQVPAAAPQTVMSS
NLTPMLAPPPPRRTPKQHNCHSCGKNFSSASALQIHERTHTGEKPFVCSICGRAFTTKGN
LKVHMGTHMWNNAPARRGRRLSVENPMALLGGDAMKFSEMFQKDLAARAMNVDPGFWNQY
AAAISNGLAMKNNEISVIQNGGIPQLPVSLGGGGIPSLGSMSGGMSGGMDRAHTGSSPPM
TGLEKASLEVGAGHPFSRFIEDNKEIGIN
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgcaagcaagcgaagcctcagcatctcaagtcggacgaggacccttcagtt
gttggggtaatatccgaaaatgtcccaggtgaagtcctggaggatgcagacagtgggaac
gagagtcgcagcggcagcgaggagactcatgtgtgcgagaaatgctgcgcggagttcttc
aaatggtccgacttctgcgagcacttgaaaacctgcaccaagaaccccctggtgctgatt
gtgaatgagaacgaggccactccagacccctccctggagtaccccggggagccctcgccc
gtccccagctgccccagcgaccctgcagacagtgaggaggccggggagggcagccagacc
ccagccgagggggacgatggggcggagatgatgctggagaggggagcagctacaatggag
aaagacgacgagcccatggaggtggaaatgtccccggagaagcctgcggtggacccagag
gaccaggatgcttcagccgagcccgacgcccccctacctcagattgatgatgctgtccag
ccctcggggactggaagctatggcatgcccagcacaaatgtcaccctggagacattgcag
agcactcgtgtggctgtggcccagttctcgcagagcttcagaggaggggccttggcggga
ggtgtctccaccatggccattcccatgatcctggaccagttgatggccctgcagcagcag
cagatccaccagctccagctcattgagcagatccggaaccaagtggcactgatgaacagg
cagccctccagtcagccagcccttggccaccacgctccacaccacagcaccggctcagca
tcccagggagtggcctcctcctcctgcatcccagcgctgcctagtcagctgcagctccac
aacttcataacacctccggtgcaccaactgccagtcagggtcccagcaacgctgaacggc
ccgggccctgcatcgctaacatccgttctcgagggtccccttaaccatgccacccaggca
ggaggcccgctggccagtgctgggctgtccaacagcacgtccaccaactcttcgttccct
ccatcgagcagcaatgtggtgtcctctttactgcccccaagcacaatttgtaacacaagc
agcatcagcagcagcagtgctggagcattaggtggcattaccagcagtgtcaccctacct
aggaactcctctagtcccccaaccttgacccacggcagcctcttgagttcatcctccagt
atctcaaacatgcctctgatacctcacagttcctcaagtagcgtcatattccccaaccca
cttgctagcatcgcagccacggctaatgcccttgatcccctgtcggctatgatgaagcat
cgtaagggcaagccgccgaacgtgtctgtgtttgacaccaagcctagctctgatgatccc
ttcttcaaacacaaatgtaggttctgcgccaaggtctttggcagtgacagcgctcttcaa
attcacctgcgctcacacactggtgaaaggccgttcaagtgcaacatatgtggcaaccgc
ttctcgacaaagggcaacctcaaggtccacttccagaggcataaagaaaaatatccccac
attcaaatgaacccgtatccagttccagagtacctggacaatgtgcccaccagctcaggc
atcccatatggaatgtcacttcctccagagaaaccagtcaccacttggctggacagcaaa
cctgtccttcccacaataccaacctctgttggcctccagctcccaccaaccctccctagc
atgatgagtggctacggtgattctccaagtcttacccctttaagcagatcacctcaaagg
ccatctccaccatccagtgagtgtgcttctctgtctcctaatctgctcaattctgaggcc
agtatgtcccgcacttctgagtcacctcggcccaacaacactgccgggattgacgcatct
cctgttctgaaacctgagggagttcatctgccgcccaactgcaccacaaggccaggggag
accactaacagcaacacaacctctgtgacccaggtcgcgatctcggcaactgtcaccatg
accacagccactactcagaacaccaaccccacgactcctcccacctcgacctcccaccct
tctctccctatgatgtccgaccagttcaaagccaagtttccttttggggggctcctggac
tctatgcaaacctcagaaacctcaaagctgcagcagctagtggagaacattgacaagaag
atgacggatcccaaccagtgtgtcatctgccaccgagtgctcagttgccagagtgccctg
aagatgcactaccgcatccatactggagagagacccttcaaatgcaagatttgtggccgt
gcattcaccaccaagggcaacctaaaaacacactttggggttcacagatccaaaccccca
cttcgtgtccagcactcttgccccatctgccagaaaaagttcactaacgccgtggtgctt
cagcagcacatccgaatgcacatgggaggacacattccaaacactcccctaccagaggga
tttcaggacatggacactgatctgtcatttgatgagaagagccttgatgccatgagcaac
tatgacgatgatctcattgatgaaatggagcaggctatggaagatgaggctgatctgaaa
gatggggaaattgatccaaccaaacccctcatgcactcatcagagatgtctccaggaagc
tctcccccgacctccgtcatctccagtattgccgccttggagaaccagatgaagatgatc
gactccactgtaaacatgactcgttcttttagacagaaacccatggagaacgggatcggc
ttcgggggcgagaacgactgcttcaaccacgactcattttcggctggaggcgacctcgaa
aaccacagtgtggggagtccagccttgtccgagtcgtctggctccatgcaagctctctcg
ccgactcacagccaatccgagagtcaccgttccaagtccccaggcacaacaaacaacact
ggagctccagcagaggagggtcagggacagggacagggacaggagagtgggtctgccaca
gccacggtgaaatctgaaaaatctgaaacgccttccccagcttctgcagcagagaacaat
ggagccctggacctaactgcaacccagcctggaaggcactttatcaaagaggaacatcag
ttcagcatgctcttcttaggcagagacagaggttttaacagtcccggcatggtcactgca
cccaacatgatcaaactggagatgaacggccacagcaaaccgtcctcactaagtgaaggt
ccccacatgcccatgggcatccaggtacccgctgctgcaccccagacagtgatgagctcc
aacctcacacccatgctggctccacctccaccccgccgcacccccaagcagcacaactgc
cattcttgtgggaagaatttctcgtcggccagcgctttgcagatccacgagcgcactcac
actggagagaagccctttgtgtgctccatctgtggaagggcattcaccaccaagggaaac
ttgaaggttcatatgggcacacatatgtggaacaatgccccagccaggagagggcgtcgt
ctttcggttgaaaacccaatggcccttttgggtggtgacgccatgaagttcagtgaaatg
ttccagaaggatctggcggcacgggccatgaatgtggacccaggattttggaaccagtat
gcggctgccatcagcaatggcctggccatgaagaacaatgagatctctgtcatccagaat
ggaggtatcccccaactgcctgtcagtttaggtggtggtggtatcccctcactggggagc
atgtcagggggcatgtcgggaggcatggacagggcacataccggcagtagcccccctatg
actggtctagagaaagccagcctagaggtgggggctggacaccccttttcaagatttatt
gaggacaataaagagattgggatcaattaa
DBGET
integrated database retrieval system
