Alosa sapidissima (American shad): 121721198
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Entry
121721198 CDS
T11137
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121721198 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121721198 (prpf31)
Spliceosome [BR:
asad03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121721198 (prpf31)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
121721198
NCBI-ProteinID:
XP_041963860
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Position
10:complement(28856005..28862597)
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AA seq
512 aa
AA seq
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MSLADELLADLEEAGDEGEDGLYPGEEGGGSDGEVEESVVAAGLEDIPEEMELDYSGAES
VTSIAKLRHSKPFSEITEKIAEYVAKQQQTKEVSGPVESDPEYKLIVAANNLTVEIDNEL
NIIHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVV
SVTASTTQGVMLGDDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKLMGVAGGLTNLSKMPACNLMLLGAQRKTLSGFSSTSLLPHTGYIYHCDVVQTLPPDL
RRKAARLVSAKCTLAARVDSFHESAVGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKNANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RAAQVNDATKARISKSLQRTLQKQSMVYGGKSTVRDRSSGISSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFVKVKKEGESSVKP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggctgacgaactgctcgctgacttggaagaggccggtgacgagggagaggat
ggactgtatcctggcgaggaaggtggaggaagcgacggagaggtcgaagagagtgtggtt
gcagcaggcctagaggatatccccgaggagatggagctggattacagtggggcggaaagt
gtcacatctattgcaaaattacgccacagcaaacctttttcagaaatcacggagaaaatt
gcagaatatgttgccaaacagcaacagaccaaagaagtgtctggacctgttgagtcagac
ccggagtacaagctgatcgttgctgccaacaacctgaccgtggaaattgacaatgaactg
aatatcattcataaatttgtgcgcgacaagtactccaagcgattcccggagcttgaatct
ctggtcccaaacgcactggactatatcaggactgttaaggaactgggcaacaacctggac
aagtgcaagaacaatgagaacctccagcagatcctcaccaacgccaccatcatggtggtc
agtgtcacagcctccaccactcagggggtgatgctgggagacgatgagctccagcgattg
gaggaggcctgcgacatggctctggagctgaaccaatcaaagcacagaatctatgagtac
gtggaatccaggatgtcgttcattgccccaaatctgtccatcatagttggggcgtcgacc
gcagctaaacttatgggtgttgctggtggcctgactaacctctccaagatgccggcatgt
aacctgatgctgttgggggcccagcggaagaccctttccggcttcagcagcacctctctg
ctcccccatacaggctacatctaccactgcgacgtggtgcagacgctcccaccggacctg
aggaggaaggcggctcgcctggtgtcggccaagtgcacgttggcagctcgggtggacagc
tttcacgagagcgcagttggcaaggtgggttatgacctgaaagaggaaattgagagaaaa
tttgacaagtggcaggagcctcccccagtgaagcaggtgaaaccgctcccagccccactg
gatggccagaggaagaagagaggaggcaggagataccgaaagatgaaggagcgtttgggc
ctgactgagatcaggaaaaacgccaacagaatgacatttgctgagattgaggacgacgca
taccaggaggacctgggcttcagcttgggtcagttgggcaagtctggcagcgggagggtg
agggcagcacaggtcaacgatgccaccaaggccaggatctccaaatccctgcagagaacc
ctgcagaagcagagcatggtgtatggagggaagtccacagtcagagacagatcctctgga
atcagctccagtgtcgctttcacacccttacagggtctggagattgtgaatcctcaggct
gcagagaagaaggtagcagaggccaatcagaagtacttctccaacatggccgagtttgtc
aaggtcaagaaagagggagaaagcagtgtcaagccttga
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