Alosa sapidissima (American shad): 121721385
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Entry
121721385 CDS
T11137
Symbol
dync1i1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04145
Phagosome
asad04814
Motor proteins
asad05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121721385 (dync1i1)
09142 Cell motility
04814 Motor proteins
121721385 (dync1i1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121721385 (dync1i1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121721385 (dync1i1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121721385 (dync1i1)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
121721385 (dync1i1)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
121721385 (dync1i1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Dynein_IC2
Beta-prop_EML
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
SNAPC2
Beta-prop_SPT8
Rrn6_K-rich
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
121721385
NCBI-ProteinID:
XP_041964200
LinkDB
All DBs
Position
10:complement(9926577..9936982)
Genome browser
AA seq
650 aa
AA seq
DB search
MSEKSDLKAELERKKQRLAQIREEKKRKEEERKKKESEAQQKAESVSEDSDLDRKRRETE
ALLQSIGISPEPPLVQPLQLLTWDTCYFHYLVPTPMSPSSQSVSTPSEAGSQESVNGGTM
GRYRTLQWDTDPSVLQLLDDSDVGRKVHRLGASKITQVDILPKELVTYCKETQTPLAAHQ
SEATEEEEDEEIPVPKPETETDLLDNEDNQEPTEVHPRELTEEERQQITHSEDFLMFFDR
TIRVMERALAEDSDIFFDYSGRDMEDRDGDTQAGSNLSFNRLFYDDHWSKHRVVTCLDWS
PQFSELMVTSYNSNEDAPHEPDGVVLVWNMKFKKTTPEYIFHCQSSVMSVGFAQFHPNLV
VGGTYSGQIVLWDNRSHRRTPVQRTPLSSAAHTHPVYCVNVVGTQNANNLITVSTDGKMC
SWSLDMLSQPMESMELVYNKSKPVAVTGMAFPAGDVNNFVVGSEEGTVYTASRHGSKAGI
GEMFEGHQGPVTGISCHNAVGPIDFSHLFTTSSFDWTVKLWSTKHNKPLYSFEDNADYVY
DVMWSPVHPALFASVDGMSRLDLWNLNNDTEVPTASVSVEGACALNRVRWASGGREVAVG
DSEGRVWIYDVGEQLAVPHSEDWSRFARTLVEIRANQGDGEEEGAMEMAA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaaagtgacctgaaagctgagcttgagcgcaaaaagcagcgccttgctcag
atccgagaggagaaaaaaaggaaggaggaggagaggaaaaagaaggagtcagaggctcag
cagaaggcagagagcgtgtctgaggattcggatttggaccgcaagcggagagagacagaa
gccctgctgcagagcattgggatctcaccagagcccccattagtgcagccactgcagctt
ttaacatgggatacctgttattttcattatttagtcccaacccctatgtctccctcttcg
caatcagtgagcacgcccagcgaggccggcagccaggagtcagtgaatggagggactatg
ggaagatatagaaccctacaatgggatactgacccctctgttcttcagttactagacgac
tctgatgttggtcgcaaggtccacagacttggtgcctccaaaataactcaagtggacata
ctgcccaaggagcttgtgacatactgcaaggagacccagacgcctctggcagctcatcag
tcagaagccacagaggaggaggaggatgaagagatcccagtgcctaagcccgagactgag
actgacctgctggataatgaggacaatcaggagcccacagaggttcacccaagagagctg
accgaggaggagaggcagcagatcactcactcagaggacttcctcatgtttttcgaccgg
accatccgggtgatggaacgtgccttagccgaggattcagacattttctttgactacagc
ggacgtgatatggaagacagagacggggatacgcaggccggatccaatttgtctttcaat
cgattgttctatgacgaccactggtccaaacatcgagtcgtgacatgcttggattggtcc
cctcagttctctgagctgatggtgacatcttacaatagcaatgaagatgctccacacgaa
ccagatggggttgtgcttgtgtggaacatgaagtttaagaagacaacacctgaatatata
ttccactgtcaatcctcggtgatgtctgtgggatttgctcagtttcaccccaacctagtg
gtgggaggaacgtactcggggcagattgtgttgtgggataaccgcagccaccgccggacc
cctgtgcagaggacccctctatcatcggctgcgcacacacaccctgtatactgtgtgaat
gtggttggtactcagaatgccaacaacttgataacagtatccacagatggaaagatgtgt
tcctggagtttggacatgctctcgcaacctatggagagtatggagctggtgtataataag
tccaaacctgtggcagtcacaggaatggcattccctgctggtgacgtgaacaattttgtg
gtgggcagcgaggaggggaccgtgtacacggcgtcccgccatggaagtaaggctggcatc
ggggaaatgtttgaaggacaccaaggcccagttactggcatcagttgccataatgctgtg
ggcccaatcgatttctcccatcttttcaccacctcctcatttgactggaccgtgaaactg
tggagtactaagcataacaagccactctactcctttgaggacaatgcagactatgtctac
gatgtgatgtggtcacctgtccatccagcactgttcgcgtctgtggatggaatgagtcga
ttggacctgtggaacctgaataatgacacagaggtgcccacagccagtgtgagcgtggaa
ggtgcctgtgccctgaaccgagtgagatgggcatcaggaggcagggaggtggcagtggga
gactcagagggtcgcgtctggatctatgatgtaggagagcaactagcagttccacactct
gaggattggagccgctttgctcgcacgctggtggagatccgtgccaaccaaggagatggt
gaagaggagggtgccatggagatggcagcttaa
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integrated database retrieval system
