Alosa sapidissima (American shad): 121721434
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Entry
121721434 CDS
T11137
Symbol
spag1b
Name
(RefSeq) sperm-associated antigen 1
KO
K19870
sperm-associated antigen 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121721434 (spag1b)
04812 Cytoskeleton proteins [BR:
asad04812
]
121721434 (spag1b)
Cilium and associated proteins [BR:
asad03037
]
Motile cilia and associated proteins
Dynein assembly factors
121721434 (spag1b)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
121721434 (spag1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
RPAP3_C
TPR_8
TPR_9
TPR_BSK1_C
TPR_11
TPR_12
Fis1_TPR_C
TPR_17
TPR_16
TPR_19
ANAPC3
SRP_TPR_like
Alkyl_sulf_dimr
Motif
Other DBs
NCBI-GeneID:
121721434
NCBI-ProteinID:
XP_041964279
LinkDB
All DBs
Position
10:7595596..7610535
Genome browser
AA seq
928 aa
AA seq
DB search
MSAEIVNGLLNTEVINSSKIPVEHLDYDYIQKCTDVGYLEKILKVLRSGEEGIYPHLIDF
CEKHVEKLNPRSRALRKDKPAASAASLPKDEWSQISEELESWETEMRAGEVQLKQLPLFG
DEENVPPIRGSNCSVQSTSASGVKKNKNKAPCPRDYKDWDKFDVEKECAKVDEVVTNDSA
RTVINHSHPKIKTNLHTSVLTEQEKVVLANREKDKGNEAFKTGDYEEALAYYSRSLSILP
TVAAYNNRAQAEIKLQNWHKALSDCQKVLELEPANAKGLLRRATVQKHLGNLQLAVDDVN
AVLHIEPHNEIAKKLLNELSKKMAERVPEKPAKRQKMLIEEIEEEEEEKEHEARDGAVDS
SSRQRAGGESCAAAATGEERGDMGNAQKKPHGRGDGGGGGRGGCSADKYTVTPPKGEEGA
RKGLANGNSAAHQAEKADRERAEQSKVNLDAPAGNLPPRLARLKNEGNHLFKNGQFGDAI
GKYSQAIDGYTEAGVDSPEDLCILYSNRAACYLKDGNSSDCITDCTKSLELQPFSLKPLL
RRAMAYESLERYRNAYVDYKTVLQIDIGTQAAHDSVNRITRMLIEQDGPEWREKLPEIPM
VPLSAQQHRREEPPSAEEAQARAERATQEAARKAEARFTLFKSDGNEFVKKGRYEEAVGK
YSECLKLKSNECAIYTNRALCFVKLDRFAEAKQDCDAALALEPENKKAFYRRALANKGLK
DYLACSTDLQEVLRLDSSVAEAERELQEVTELLRQSLAAAASPGKARRSVPITEVDDTEE
AATKKQDTTTEQNHVDQAKSIAITQPANAYEFGQALSVARSHDDTAACAELLRLVAPETL
PSYVSTYLDGHTLAFIMQALDDHLLDKEPGLVYQHLNHLHTAERFSMLLMLLDKDKRRQM
TQLFEHLSAVESEDFSQNDVQNLANKYI
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgaaatagtgaacggtttgctgaatacagaagtgatcaattcaagcaagatt
ccagtagagcatctggattatgactatattcagaagtgcactgatgtcgggtacctggaa
aagattttaaaagtcctcaggtctggagaagaaggcatttacccacatctcattgatttc
tgtgagaaacatgttgagaagctgaaccctaggagccgtgccctacgaaaagacaaacct
gcagcatcagctgcatctctccccaaagatgaatggagccagatttcagaggaactcgag
agctgggagacagagatgagggcgggtgaggtgcagctcaaacagctccccttgttcggt
gacgaggagaatgtgccacccatccgaggctcaaactgctctgttcagagcacatctgct
agcggtgtaaaaaagaacaaaaacaaggctccttgtccacgtgactataaggactgggac
aaatttgatgtggagaaagaatgtgctaaagttgatgaggtggtcactaatgactcagcc
cgcaccgtcatcaaccacagccatccaaaaattaaaacaaatctgcacacaagtgtgctg
acagagcaggaaaaggttgttttagcaaaccgcgagaaggacaagggcaatgaggctttt
aaaactggtgactatgaggaggcattggcatattactcaaggagtctgtcgatattacca
acagtcgctgcatacaacaaccgagcccaggcggagatcaaactgcagaactggcacaag
gccctcagcgactgccagaaggtcctggagctggagccagccaatgccaaaggtctgttg
cgtcgtgccactgtgcagaagcaccttggaaaccttcagctggccgttgatgatgtcaac
gctgttctacacatagagcctcataatgagattgcaaagaaacttctgaatgagctgagt
aagaagatggctgaaagagttcctgagaagccagctaagagacagaaaatgctcatagaa
gaaattgaggaggaagaggaggagaaagagcacgaggccagggacggtgcagttgacagc
agcagtcgtcagagagcgggtggggagagctgcgcggcggccgctaccggagaggagaga
ggcgacatgggcaacgcgcagaagaagccccacggccggggcgatggcggagggggaggc
agggggggctgcagcgccgacaagtacacggtcacgccgcccaagggagaggagggggcc
aggaaagggctggccaacggcaacagcgccgctcaccaggcagagaaagccgaccgagag
cgagcggagcagagtaaggtcaacctggacgcgccggccgggaacctaccaccgcggctg
gcccgcctcaagaatgaaggcaaccacctctttaagaacggacagtttggggatgctatt
ggaaagtactctcaggctatcgacggctacactgaagcaggcgttgacagtccagaggac
ctctgtatcctgtactccaatagagctgcctgctaccttaaagatgggaacagttcagac
tgtattacagactgcacaaagtccttggagctgcagccgttctcgctgaagccgctgcta
aggagagccatggcttacgagtcgctggagcgctaccggaatgcctacgtcgactacaag
accgtgttgcagatcgacattggcacccaggctgctcacgacagcgtcaacaggatcacc
cggatgctgattgagcaggacggccccgagtggcgggagaagcttccggagatccccatg
gtgcccctgtcggcccagcagcaccgcagagaggagccgcccagcgccgaggaggcccag
gcacgggcagagcgcgccacccaggaggccgcccggaaagcagaagcacgcttcacactc
ttcaagtccgacggaaacgagtttgtgaagaaaggccggtatgaggaagcagtgggaaag
tacagcgaatgccttaaactgaagtccaacgagtgcgccatctacaccaacagagctctg
tgttttgtgaaacttgatcgttttgcggaagccaagcaggactgtgatgcggccctggcc
ctggagcccgagaacaagaaggccttctacagacgagcactggccaacaagggcctcaag
gactacctggcctgcagtacggacctgcaggaggtgctgcgtctggactccagcgtggcg
gaggctgagcgggagctgcaggaggtgaccgagctgctcaggcagagtctggcggccgcc
gcctccccggggaaagcccggcggagcgtccccatcacagaggtcgacgacacagaagaa
gccgccaccaaaaagcaggacaccacaacagaacagaaccatgtggaccaagccaagtcg
atcgccatcacccagcccgccaacgcctatgagtttggacaggctttgagtgtagcccgt
tcccatgacgatacggcagcctgcgccgagctcctccgcttggtcgccccggaaacgctc
ccgtcttacgtgagcacctatctggacggtcacacccttgctttcattatgcaggcgctg
gacgatcacctcttggacaaagagcccggcctggtgtaccagcacctcaaccacctccac
acagcggagcgcttctcgatgttgcttatgctacttgacaaagacaagcgtcggcagatg
actcagctgtttgagcacctgtcagcggtggagagcgaggacttctctcagaacgacgtg
cagaatctagcgaataaatacatctga
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