Alosa sapidissima (American shad): 121721440
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Entry
121721440 CDS
T11137
Symbol
ago1
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121721440 (ago1)
03036 Chromosome and associated proteins [BR:
asad03036
]
121721440 (ago1)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121721440 (ago1)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121721440 (ago1)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121721440 (ago1)
microRNA pathway
RISC loading complex
121721440 (ago1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
121721440
NCBI-ProteinID:
XP_041964300
LinkDB
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Position
10:complement(38105250..38133960)
Genome browser
AA seq
863 aa
AA seq
DB search
MEPGPSGAVPMGPYPPPLQQVFQAPRRPGMGTVGKPIKLLANYFEVEIPKMDVYHYEVDI
KPDKCPRRVNREVVEYMVQHFKPQLFGDRKPVYDGKKNIYTVLALPIGSEKVDFEVTIPG
EGKDRIFKVSIRWLAKVSWRLLQETLVSGRLQVPLDSVQALDVAMRHLASMRYTPVGRSF
FSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIR
NIDEQPKTLTDSQRVRFTKEIKGGPITGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPL
QLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKL
TDNQTSTMIKATARSAPDRQEEISRLMKNANFNLDPYIQEFGIKVKDDMAEVTGRVLPAP
ILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRK
ISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLIIVILPGKTPVYAEVKRVG
DTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGA
DVTHPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKS
TRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLF
CADKSERIGKSGNIPAGTTVDTSITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTA
DELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHVSGQSNG
RDPQALAKAVQIHHDTLRTMYFA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggaccatctggcgctgtgcccatggggccttacccccctcccctgcagcag
gtgtttcaggccccgcgccgtccggggatgggcactgtgggcaaacccatcaagctgctg
gccaactactttgaggtggagatccccaagatggacgtgtaccactacgaggtggacatc
aagcctgacaagtgcccccgccgagtcaacagagaggtagtggagtacatggtgcagcac
ttcaagcctcagctgttcggtgaccggaagccggtgtacgacggcaagaagaacatctac
actgtgctggctctgcctattggtagcgagaaggtggactttgaggtaaccatcccgggt
gaggggaaggaccgcatcttcaaggtgtccattcgctggctggccaaagtgtcatggcgg
ctgcttcaggagacgctggtgagcggccggctgcaggtgcccctggactcggtgcaggcg
ctggacgtggccatgcgacacctggcctccatgaggtacacgccggtgggtcggtccttc
ttctcccccccggaggggtattaccaccccctgggcggaggcagggaggtgtggttcggc
ttccatcagtcggtcaggccagccatgtggaagatgatgctcaacatagacgtgtctgcc
acggccttctacaaagcacagccagttatcgagttcatgtgtgaggtcctggacatccgt
aacatcgacgagcagcccaaaacactcaccgactcccagagggtccgcttcaccaaggag
atcaaaggtgggcctataactggtctgaaggtggaggtgacgcactgtggtcagatgaag
aggaagtaccgcgtctgcaacgtcacacgtcggcccgccagccaccagacgtttcccctc
cagttggagagtgggcagacagtggagtgcacggtggcccagtatttcaagcagaagtac
aatctgcagctcaagtacccccacctgccctgcctgcaggtggggcaggagcagaagcac
acctacttgcccctggaggtttgtaacatagtagcaggtcagcgctgcattaagaaactg
actgataatcagacctccaccatgatcaaagccacagcccgctctgcaccagacagacag
gaggagatcagccggctgatgaagaatgccaacttcaacctggacccctacatccaagag
ttcggcatcaaggtgaaggacgacatggcggaggtgactggacgagtgttgcctgctccg
atccttcagtacggtggacggaaccgagccatcgccactccaaaccagggcgtgtgggac
atgagagggaagcagttctacaacggcattgagatcaaagtctgggccatcgcctgcttc
gctccacagaaacagtgccgcgaggaagtgctcaaaaacttcaccgaccagctgcgtaag
atctccaaagacgctgggatgcccatccagggccagccgtgcttctgtaagtacgcacag
ggagcggacagcgtggagcccatgttccgacacctgaagaacacctacgccggcctgcag
ctcatcatcgtcatcctgcccggcaagaccccggtctacgctgaggtgaagcgggtaggg
gacaccctcttgggaatggccactcagtgtgttcaggtgaagaacgtggtgaagacgtca
cctcagaccctctccaacctctgcctcaagatcaacgtcaagcttggtggcatcaacaac
atcctggtgccacaccaacggtcggcagtgttccagcagcccgtcatcttcctcggggca
gacgtcactcacccacctgccggggacgggaagaagccctccatcactgcggtggtgggc
agcatggacgcccaccccagccgctactgtgctacggtgcgggtgcagaggccgaggcag
gagatcatcgaagacctctcgtatatggtgcgtgagctgctcattcagttctataagtcc
acacgcttcaagcccacccgcatcatcttctaccgggacggcgttccagaaggacagctg
ccacagatccttcactatgagctgctggccattagagatgcctgcattaaactggagaag
gattaccagccagggatcacctacattgtggtgcagaaacgccaccacacccgcctcttc
tgcgccgacaagtccgagaggattgggaagagtggcaatattccagcaggcactaccgtg
gacaccagcatcactcacccctttgagtttgacttttacctgtgcagccatgctggcatt
cagggcacaagccggccttcccactactacgtgctgtgggatgacaaccgcttcacggcc
gacgagctgcagatcctcacctaccagctgtgccacacctacgtgcgctgcacccgctcc
gtctccatccctgcgccagcctactacgcccgtcttgtggccttccgcgcccgctaccac
ctggtggacaaggagcacgacagtggggagggcagccatgtgtcgggtcagagtaacggc
cgggacccccaagcgctggccaaggctgtgcagatccaccatgacaccctgaggaccatg
tactttgcctga
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