Alosa sapidissima (American shad): 121721470
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Entry
121721470 CDS
T11137
Symbol
atg5
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04136
Autophagy - other
asad04140
Autophagy - animal
asad04216
Ferroptosis
asad04621
NOD-like receptor signaling pathway
asad04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121721470 (atg5)
04136 Autophagy - other
121721470 (atg5)
09143 Cell growth and death
04216 Ferroptosis
121721470 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121721470 (atg5)
04622 RIG-I-like receptor signaling pathway
121721470 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121721470 (atg5)
03029 Mitochondrial biogenesis [BR:
asad03029
]
121721470 (atg5)
Membrane trafficking [BR:
asad04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
121721470 (atg5)
Mitochondrial biogenesis [BR:
asad03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121721470 (atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121721470
NCBI-ProteinID:
XP_041964377
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Position
10:11208822..11231731
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AA seq
275 aa
AA seq
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MADDKDVLRDVWFGRIPTCFMLYQDEVTEREAEPFYLLLPRVSYLTLVTDKVKKHFLKVM
KQEDVEEMWFEYEGTPLKWHYPIGVLFDLHASNTALPWSVTVHFKSFPERDLLHCPSNSV
IEAHFMSGIKEADALKHKGQVINDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEEG
GFRYIPFRIYQAMSERPFIQKLFRPVSPEGQPYTLGDLLKEMCPSALPQDDEPKRYQVVI
HGIEPMLETPVQWLSEHLSHPDNFLHISIIPVPSD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaaggatgtattgcgtgatgtctggttcgggaggattccaacgtgtttc
atgctgtaccaggacgaggtcactgagagggaggctgagcccttttatcttctcctgcca
agggtaagctatttaaccctcgtcactgacaaagtgaagaagcactttctgaaagtgatg
aagcaagaggatgttgaggagatgtggtttgaatacgaggggacacctttgaaatggcat
tacccaattggagtgttgtttgatctacacgcatcgaacactgccctaccctggagcgtc
acggtgcactttaagagtttccctgagcgggacctgcttcactgcccatccaattctgtg
atcgaagcccacttcatgtctggcatcaaggaggctgatgcactcaagcacaagggccag
gtgatcaacgacatgcaaaagaaagaccacaagcagctgtggatgggccttcagaatgat
aaatttgaccagttctgggccatgaatcgaaagctgatggaatatccaactgaggaagga
ggcttccgctacatacctttcaggatataccaggccatgagcgagaggcccttcattcag
aagctcttccggccagtgtcacccgagggtcagccctacacactgggagaccttctgaag
gagatgtgtccttcggccctgccccaggacgatgagccaaagcgatatcaggtggtgatt
cacggcatcgagcccatgttggagacgcctgtccagtggctgagcgagcacctgagtcac
ccggacaacttcctccacatcagcatcatcccggtgcccagcgactga
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