Alosa sapidissima (American shad): 121721472
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Entry
121721472 CDS
T11137
Symbol
scn1ba
Name
(RefSeq) sodium channel, voltage-gated, type I, beta a isoform X1
KO
K04845
voltage-gated sodium channel type I beta
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121721472 (scn1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121721472 (scn1ba)
Ion channels [BR:
asad04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121721472 (scn1ba)
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Motif
Pfam:
V-set
ig
Ig_3
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
121721472
NCBI-ProteinID:
XP_041964382
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Position
10:complement(10687533..10702886)
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AA seq
229 aa
AA seq
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MMMSALRILLVPLALCTLHACLSHAACVEVDSDTEAVAGEGFKMGCISCKLRGEVEATAT
VDWYFMAKGEREFSHIFRYDPEDAPKLDELDIRDERFYGRLDWNGSKNTLDVQDGSIYIL
NVTFNDTGTYRCHFDRHLTFTNYDYHTNTTKFVVINVVPKATRGLASILSEVMMYVSIIG
LQLWLVVEMVYCYRKIAAAGEEALRESAAEYLAIASGGKDNCAGVQESE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtctgcactgcggatactgctagtccctctcgctctctgcactttgcacgct
tgtcttagtcatgcggcgtgcgtggaggtggactcggacacggaggcggtggcaggtgag
gggttcaagatgggctgcatctcctgcaagctgaggggggaggtggaggccaccgccaca
gtggactggtacttcatggccaagggagagagagaattctcccatatcttcagatatgac
cctgaagacgccccaaagctagacgaactcgacatccgtgacgagcgtttctacggccgt
ctggactggaatggcagcaagaacacactggacgtgcaggacggctctatctacatcctc
aacgtcaccttcaatgacacaggcacctaccgctgtcactttgaccgccatctcaccttc
accaactatgactaccacaccaacaccaccaagttcgtcgtcatcaatgtggtgcccaaa
gccactcgaggcttggcctccatcttgtcggaggtaatgatgtacgtatcgatcattggg
ctccagttatggctggtggttgagatggtgtactgttaccggaagatagcggccgcaggg
gaggaggccttgagagagagcgcggcggagtacttagccatagcctcggggggtaaagat
aactgtgcaggtgttcaggagtcagaataa
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