Alosa sapidissima (American shad): 121723221
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Entry
121723221 CDS
T11137
Symbol
carmil2
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 2 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121723221 (carmil2)
Membrane trafficking [BR:
asad04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
121723221 (carmil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
DUF445
DUF3915
Motif
Other DBs
NCBI-GeneID:
121723221
NCBI-ProteinID:
XP_041964619
LinkDB
All DBs
Position
11:complement(4338674..4390537)
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AA seq
1718 aa
AA seq
DB search
MALHSTVPYSVQDAITQLLRPQRVEFMRQVMLVQSKSRTENRILVITQWRAYMFHSKQPV
KVESSFSYLEIYAIAIESPVKVVLETDRQSYCLSLISVEDLEAMVSHVTASLKKIFPDSS
PGKLLKKIPPDLKDRLLKLTSNVEDHLNGTQGPCGGFSVTYEALCDFNELPCREEVQWDV
DNIYHVQNCREFNLLDFSHLESRDLALAVAALSFNEWFTKISSKDFKVPPDVQEQILYMI
NRSETLKELCLENSGLKLDFAVKMGLAMKDRTCPALHIINLSANQIEDKGVSALSQNLDK
LPHGLTQLYLSKVSLSPKGLGNLANALAQSSGLSNCLTHLDLSGNPGCMATEEAATLCKF
LSGPNVLCLLDLSGTDCPLDTLFVSLSVGCCSSLSHLNLSRNTFTHRKGREVTRSVKDFF
SKVSELRYMGLAGTKLPPAALRLLLQGLATNTRLCGLDLDISGCELRSSGAQVIQEHIFE
AKAICSLDLSDNGFENDMVTLVLAIGRSHSIRHLALGGNFAMKSKALTDVLHRIVQLIQE
EECPLESLSVCDSKLKTGTTILINSLASNANLSKINISGNFIGDTGAKMLAKALIINTKL
KTLVWDRNNVTAKGYQDVANALEKNSTLQHMSLPFSDMSQAFRSSPEKTEEALQRILKCL
LRNGQQQTGTPKHMLDLQQGLQTTQSEQLVQGLCRKLKESVQPLTSCNIQEVQGDILAAE
DVLHNAKTSITLLPSLYELGRSPSSGLMLQQVLHDTARTLTNDITEEIQELAQSLLQSAQ
SVCPRVVQRTSVNERLAHSVAKKSRQAAHFIESTMHEVETHIKNKLSELKLAVTVTLVER
VIDEVLQDLSVAQQKLDRHVEDHTQISSLRTNVPQLRVVEHEFPTDEYVPVIWRNSFHTK
SIRPSPSVKSLLDVDAEQQARESSAHYQHEGVGGGVGVRGGGGSLLLLAPALAGPREVEF
ESRGRASSLSLATALSVKPRPRGSSYAGGQEADVAAAATAAAAAAAAAAATAALSHSEAR
RPEPAPPRPPMDLPIEGHTLRHYTRSRPRPNRRNRQPPSKPQEQAAEGENEVNENMGRVD
EGVEEFFTKKIIPDDPLKHQREEPLIKAQPPTESAPTTTTAPPNTTSTTSSTTTASNITT
STTSTTPTPTAPASKNIKKKFGDFFAFKKVRAARGTKGEGAPEGKAKKTSIADLIRPLRE
AARAEKEREKEREREKEREREKEREKEKEKAHEGEEEEEEEAVHIIPTTTTITSAVTTPN
ITTITADADAPVKDAVRASAPSPTPSPALTSPTSPSPAPSPTPVTNEVQALSPASPSPTG
APVPSASPSAELEKGRAPDGERRPKPSRRSLREAKSQSLILLTGLEPEEGGPAAQAKKHA
SESSSSFEQRLHVMLHRMGMTKTPPSESSKSNQSKDEELKKANSEGAILDNKPEPPPTFM
KPRTMSTSSDTRRPVRPGVTGEKPAIPDRPVGPLPPKPALKPVLPLPSEAPGAPRVSPMA
PKLPSPSIEAPPPGEPDQDPGVMAAQAQPKEPPPLSPRREAPPAPSPRRGISTDARERSE
RAQSVTEETLPKPRPRMKPSPQRRAVSVHEDSLLLQQHAALLDPEELKAALPRLQRSPVR
KHANLGELPPCSEDLPEGEEGKGAGKREEDSGQAEETDCMAPSNGHRGHSPAGTSQEDQG
ETTMDGEGGETVSEQHTPAQGEPSDQRTEPPLSKTNMD
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcattctactgtgccttactctgttcaagatgccatcactcagctgttgaga
ccgcagagggtggagtttatgcggcaggtcatgctggttcagtccaaaagccgaactgag
aaccgcattctggtgataactcaatggagagcatatatgtttcacagcaagcaacctgta
aaggtggaaagttccttcagctacctggaaatctatgccattgccatcgaaagccccgta
aaggtggtacttgagacagacaggcagagctactgtctttctctcatttctgtggaggac
ctagaggccatggtcagtcatgtgactgcctcgctgaagaagatctttcccgattcatct
ccagggaagttgctgaagaagatcccccctgacctgaaggacaggctcttgaagttgacc
tccaacgtggaggatcacctgaacgggacgcaggggccatgcggtggcttctcagtgacg
tacgaggcgctgtgcgatttcaacgagctgccctgccgagaggaagtgcagtgggatgta
gacaatatctatcatgtccagaactgtcgggagttcaacttgctggacttcagtcacctg
gaaagcagggatctggccttggctgtggctgccctgtcattcaatgagtggtttaccaag
atctctagcaaggacttcaaagtgcctccggatgtgcaggagcagattctctacatgatc
aaccggtctgagacactgaaagagctctgcctggagaacagtggcctgaagctggacttt
gctgtgaagatgggcttggctatgaaagaccgcacctgccctgcactgcacattatcaac
ctgtcagccaatcagattgaggacaaaggtgtttctgccctcagtcagaacctggataag
ttgccccatggtctaacccagctgtacctatccaaggtgtctctctcccctaaagggctg
ggcaatctggccaatgctttggcccagagcagcggcctttccaactgcctgacgcatctc
gatttgtcaggaaatccaggttgcatggcaacagaggaggctgcgactctctgcaagttc
ctatcaggccccaacgttctgtgtctcctggacctcagtgggacagactgtcctctggac
acgctcttcgtgtcattgtctgtgggttgctgctccagtctgagtcacctcaatctctcc
agaaacacctttacccacagaaaagggcgagaggtgacacgcagtgtgaaagacttcttt
agcaaagtctctgagctgcggtatatggggctggctggaaccaagctcccaccggcagct
ctcaggctgttgctgcagggtttagctaccaacacacgtctgtgtggactagacctggat
atcagtggatgtgagctgaggtcctccggagcacaggtgattcaggagcacattttcgaa
gccaaggccatctgcagtctggacctgtctgacaacgggtttgagaatgacatggtcact
ctggtgttggccatcggccgtagccactcaatccgtcaccttgcactggggggaaacttt
gccatgaaatccaaagctctcactgatgtcctccaccgcatcgtccagctaatccaggag
gaggagtgtcctctggagtctctgtctgtgtgcgactctaagctgaagacgggcaccacc
atcctcatcaatagcctcgccagcaatgccaacctctccaagatcaacatcagcgggaac
ttcatcggagacacaggtgccaagatgctggccaaggccctgatcatcaacactaagctc
aagactctggtgtgggatagaaacaacgtgacggccaagggctaccaggatgtggccaac
gcactagagaagaactccacactgcagcacatgtctctgcccttcagtgacatgtcgcag
gccttccgcagcagtcctgagaaaaccgaagaggccttgcagcgtatcctgaagtgcctg
ctgaggaatggccagcagcagacagggactccaaagcacatgctggacctgcaacagggc
ctgcagaccactcagtctgaacagcttgtgcagggcctctgtcggaagcttaaggagagt
gttcagccgctgacctcctgcaacattcaggaagtacagggggacattctagctgctgaa
gatgtgctgcacaacgccaagacctccataacgctcctgccttcactctatgagttggga
aggtcgccctctagtggtctgatgctgcaacaggttctacacgacactgcaagaacactt
accaatgacatcacagaggaaatccaggagctggcgcagtcgctgctgcagtcggcgcag
tcggtctgccctcgcgtcgtgcagaggaccagtgtgaacgagcggctggcccacagcgtg
gccaagaagtcccggcaggccgcccacttcatcgagagcacaatgcacgaggtcgagaca
cacatcaaaaacaagctcagtgaactgaaactggctgttactgtcaccctggtggaaagg
gtcatcgatgaagttctgcaagacctgtctgtggctcaacagaaactggatcgtcatgtg
gaagatcacactcagatctcctctctgaggaccaatgtgccccagctaagagtggtcgaa
cacgagttccccaccgacgagtatgtcccagtcatctggaggaacagcttccacaccaag
agtatccgtccatccccgtcagtgaaaagtctgctggatgtggacgcggagcagcaggcg
agagagagcagcgcgcattatcagcatgaaggcgtcgggggaggggtgggcgtcagagga
ggaggggggagcctgctgctgctcgcgcccgctctcgccggacccagggaggtggagttc
gagtcgagggggcgggcctcctcgttgtcgttggcgacggcgctgtcagtcaagccgagg
ccccgaggctcctcctacgcgggcgggcaggaggcggacgttgctgccgcggcgactgct
gctgctgctgctgctgctgctgccgcggcgaccgctgctcttagccacagtgaggcacgg
cgccctgagcccgcacctccgcgcccccctatggacctgcccatcgaaggccacacactg
aggcactacacccgctccaggcccagacccaaccgccgcaacaggcagccgcccagcaag
ccgcaggagcaggcagcggagggcgaaaatgaagtcaatgaaaacatgggcagggtagac
gagggagtagaggagtttttcacaaagaagatcatcccagatgaccccctaaagcaccag
agggaggagcccctcattaaagcacaaccacccacagagtctgcccccaccaccaccaca
gctcctcccaacaccacctccacaacatcatccaccacgactgcctccaacatcaccacc
tccaccacctccaccacacccacccccactgcaccggcctccaaaaacatcaagaagaaa
tttggggacttcttcgccttcaagaaggtgcgcgccgcccgtggcaccaaaggggagggc
gccccagagggcaaggccaagaagacctccatcgctgacctcatccgacccctgagggag
gcggcacgggccgagaaggagcgcgagaaagagagggagcgggagaaggagcgagagaga
gagaaggagagagagaaggagaaggagaaagcacacgaaggagaggaggaggaggaggag
gaagctgtccatatcatccctaccaccaccaccatcacatccgccgtcaccacccccaac
atcaccaccatcaccgcagatgcagacgcgccggtcaaagacgccgtgcgggcctctgcc
ccctcgccgacgccctctcctgccctcacctcccccacctcgcccagccctgccccgtca
cccactccggtgaccaatgaggttcaagcgctctccccggcgtcaccctcgcccaccggg
gctccggtcccgtccgcctcaccctccgctgagctggagaagggccgcgcgccggacggt
gagcgcaggcccaagcccagcaggcgctcgctgagggaggccaagtcccagtccctcatc
ctgctcacggggttagagcccgaggaggggggacctgccgcacaagccaagaaacacgcg
tctgagagctcgtccagttttgagcagcggctccacgtcatgctccatcgcatgggcatg
accaagacgcctccctcggagtcgtccaaaagcaaccagagcaaggatgaggagctgaag
aaagcgaactctgaaggagcgattctggacaataaacctgaacctccgcccacttttatg
aagccgcgcaccatgtccacctcatcagacactaggcggcccgtacgaccaggtgtgaca
ggtgagaagccggccatacccgaccgccccgttggccctctgccccccaaacctgccctc
aaacccgtgctccccctgccctccgaggccccaggcgcccccagggtctccccgatggcc
cctaagctgcccagcccgtccatagaggccccaccgcccggggagccggaccaggaccct
ggcgtgatggcagcccaggcccagccgaaggagccgccacctctgtcccctcgcagggag
gcccccccggccccgtccccacgcaggggcatcagcacagacgccagggagcgatccgag
agagcacaatcagtcactgaagagaccctgccgaaaccacgcccccgcatgaagccctcg
ccccagcggcgcgccgtgtctgtccacgaggactcgcttctcctccagcaacacgccgcc
ctgctggaccctgaggagttgaaggcggcgttgccacggctacagaggtcacccgtgcgt
aagcatgccaacctgggggagctgccaccgtgctctgaagaccttcccgagggagaggag
ggtaaaggagcagggaagagggaggaggacagtggccaggcagaggagacagactgtatg
gcgccctccaatggccacagggggcacagcccagcagggaccagccaggaagaccaggga
gagaccaccatggacggggaagggggggaaacagtctcagagcagcacacaccagcgcag
ggagaaccatcagaccaaagaactgaaccccccttatccaagacaaacatggactga
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