Alosa sapidissima (American shad): 121723278
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Entry
121723278 CDS
T11137
Symbol
siah1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Siah1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04115
p53 signaling pathway
asad04120
Ubiquitin mediated proteolysis
asad04137
Mitophagy - animal
asad04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121723278 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121723278 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121723278 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
121723278 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121723278 (siah1)
Enzymes [BR:
asad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121723278 (siah1)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121723278 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
121723278
NCBI-ProteinID:
XP_041964773
LinkDB
All DBs
Position
11:complement(4122709..4131523)
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AA seq
336 aa
AA seq
DB search
MSRAVRPQQPVYSWKGVLKLFTCIASRTASSKPKEVDPFQEKTRALLGNHMDDEMSRQPA
PALPTGTSKSTPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCR
PKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPY
SCPCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFG
FHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEG
IATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcgccgttaggccgcagcagcccgtctattcgtggaagggggtgctcaagctg
ttcacgtgcatcgcctcccgcaccgccagcagcaagcccaaagaggtcgacccatttcag
gagaagacgcgagccttacttgggaatcatatggacgacgaaatgagtcgccagcctgcc
ccagcgctgcccacaggaacctccaagagcaccccctcccaacgcgtccccaccctgtcg
ggcaccaccgcctcgaacagcgacctggccagcctgttcgagtgccccgtgtgcttcgac
tatgtgctgccgcccatcctgcagtgccagagcggccacctggtgtgcagcaactgccgg
cccaagctgacgtgctgcccgacgtgccgcggtccgctgggctccatccgcaacctggcc
atggagaaggtggccaactcggtgctgttcccgtgcaagtacgcctcgtcgggctgcgag
gtgacgctgccgcacacagacaaggccgagcacgaggagctgtgcgagtttcggccgtac
tcgtgtccgtgcccgggcgcctcgtgcaagtggcagggctcgctggacgccgtcatgccg
cacctgctgcaccagcacaagtccatcaccacgttgcagggcgaggacatcgtcttcctg
gccacagacatcaacctgccgggcgccgtggactgggtcatgatgcagtcgtgcttcggc
ttccacttcatgctggtgctggagaagcaggagaagtacgacgggcaccagcagttcttc
gccatcgtgcagctcatcggcacgcgcaagcaggcggagaacttcgcctaccggctggag
ctcaacggccaccggcgccggctcacctgggaggccacaccgcgctccatccacgagggc
atcgccaccgccatcatgaacagcgactgcctggtgttcgacacctccatcgcacagcta
tttgccgagaacggcaacctgggcatcaacgtcaccatatccatgtgctga
DBGET
integrated database retrieval system
