Alosa sapidissima (American shad): 121723498
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Entry
121723498 CDS
T11137
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121723498 (chd7)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121723498 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
121723498
NCBI-ProteinID:
XP_041965158
LinkDB
All DBs
Position
1:complement(54942963..55012630)
Genome browser
AA seq
3143 aa
AA seq
DB search
MADPSMMSLFGDDGNLFSDELESLGDCGYPPQAQANPMGPAMGHDHQAYGPLSSSIHMPP
QAVPGQPKLGPPPTHHYDHFSQYEQPQSGRMLANGPVNGMSSPQSRYHSASTGPAPPGHH
GYPGPQADARAQAFSDGSGGTWGPPPQVVQVSEQGRPPFQPQQQAAQSQHGGSGPQGHGS
HQMSPYMGHNDYTIPGHGQTQTPPRMNHFPQSLPQEPSHFMGHVGLQQSSNIGGPPGAPP
MRHPAQQPPRHPQAPQQFLHRPNQAGHRSDAVPSAHNAQYPPSPSRQQQPQQQQQVIPGR
AHPNLGYNMHSQPVTPNTVTSSGQYPPYPPYGNLNQGLANPSGMSPSMSLNTSSSYPSQG
GPPPQQPRYPPTGGPQQGPMHQQQQPALHQMNQMNAQPMHPGQNSSAAQQKLQPQQKQQH
LPQGSYGSPPSMSPMRNLSTPAGTPPPPQHSRPPSTGLGPDMVAAGGYPGVPQSAAGNMP
LPQRVQQIPHPQQQQLSTQVYNPLSPNHRAQGRTTNPSHELPPQQGPPDQRLHPQQLQSP
PMPFQQQQLQQVCPPSAALPPPQQTHLAAIHQNSPPSQQPWAPPHQSTPPSQKVPLMQHS
PSEPPVEVTTPSGPPTSACGQSPQPTNCDQQQMESNQKPKKKKKKKAKVSETEDGESGSV
EKDPEAVLSPDATQTHPAQKKSKKKPKEKEPKTPKTPKELKEKKAKATSTPKAKSSKKPS
TKKSDSDSGLGTKKEAKRKREPSVNSDTEKTPPPSPEEEEEDDGVQKRRSSRQVKRKRYT
EDLEFKISDDDDDHSTGPKSPSNASEQQEVPDTEGPVVEKIMGMRAVKKELESGEVEVEE
FYVKFKSFSYLHCRWADVEELEKDKRIHQKVKRFKAKQALSNFLTEMDDEPFNPDYVEVD
RVLDVSESTDENGEPVILYLVKWCSLPYEDSTWELKADIDQSKIEEFERVMAREPELKRV
ERPPASDWQKSESSREYKNSNTLREYQLEGVNWLLFNWFNTRNCILADEMGLGKTIQSIT
FLHEIYLKGIHGPYLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQTYEMNYRD
AQGKVIKGAYKFHAVITTFEMILTDCPELRSVPWRCVIIDEAHRLKNRNCKLLEGLKMMD
MEHKVLLTGTPLQNTVEELFSLLNFLEPDRFPSETTFMQEFGDLKTEEQVQKLQGILKPM
MLRRLKEDVEKNLAPKEETIIEVELTNVQKKYYRAILEKNFTFLSKGGGGGGGGGGGGSS
VPNLLNTMMELRKCCNHPYLVNGAEEKILEEFRESHSTEHSDFQLQAMIQAAGKLVLIDK
LLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVQQLSKKEVEDLLRKGAYGALMDEED
EGSKFCEEDIDQILQRRTQTITIESEGKGSTFAKASFVSSGNRTDISLEDPDFWQKWAKK
AELDLDAINGRNNLVIDTPRVRKQTRHYSSMKEDELMEYSELESDSEDKPVAKPRRPQDR
AQGYSRSECFRVEKNLLVYGWGRWRDILSHGRFKRPLRERDVETICRALLAYCLLHYRGD
ENIKSFIWDLITPTEDGQSRTLSNHSGLSAPVPRGRKGKKGKCQAPQTHTPQADWLADCN
PDVLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDQADRILDGADSSELDIWIPQPF
HAEVPADWWNSEADKSLLIGVFKHGYEKYNSMRADPSLCFLEHVGMPDAKAIAAEQRGAD
MMADGVEGEDEDPEYKPVRMPFKDDMDDFTNSPLDDKEETMDVESEVKAGDSYKAGNLYW
PLASALTARLRRLITAYQRTHKREQLRQEALAKPDRRRRRFREDLLAVASEVGAYAAPEV
GSFLAEGGPFMTKGSPFIPEGAALTGDAGAFFKERRQRWTRREEADFYRVVSTFGVVYDV
AQQCFDWSQFRAFARLDKKTDESLEKYYFSFVAMCKRVCRMQAKTDTDLADPTLIIDPIT
EERASRTLYRIELLRRIREQVLPHSMLEERLLLCQPSPELPAWWEPGRHDKDLLRGASKH
GVSRTDYHILNDPELSFLEAHRRFSQPPGTSLNPPSQNTPSSLPKDEQVEAVKDKEQPEA
IATSCKAEKSDSEREEVKEEVKSGAASPKEVVKEENEEEEIKELKEEEIEEMAVEKAQED
EKSAPEKDGEEKTLVKQPVEELLESKEEQSPAAEKEPLTEGEVTSERGSEKLSEEEEEEK
IDDDKSEKSSQAEVGVTSDRKNFDEESNASLSTARDETRDDFCADDMEGSTAQTLSDRPL
TFAFWPKDRIMINRMDNICEAVIKGKWPTNRRQFFDFPGLLPGYSSMMVDSPLQRRSLGD
LSMSGQTSFNGSDDLTKSPTVSKKDGSKAPTPSVQDEALSLSVPRRRRRRRKVEIEAERA
AKRRNLMEMVAQLRESHASDDQAHAMDLTKALHGLPAPSSSSTFSAGLAASSSAALKAQM
ELLQAGTLGRPRANGSLLDIELPTRRRRGRRKNVEGLELLFMGNKRAAESADDTERTKAL
EEGGGFPARAPKHIPSAGNKGPGRGREEGEDGPSTKDLREWLRQHPTYTMDMPGYVPKSE
ELLLSQFPKPKQKRHRCRNPNKIDINTLTGEERVPVVNKRNGRKMGGAMAPPMKDLPRWL
MENPEFAVAPDWTEIVKQSGFLPESMFDRLLTGPVVREEGVRRRGRRPKSEIAKATAAAA
AQAAAAAASTTGVNPLLMNGLFGGMDLTSLQGLQNLQSLQLAAGLMGFPPALSGVGDGKH
SASPMLPLMLPGMGGLPNMFGLSSLFGAAAAATASPSNGNNSTVNTNEQGDTDAKTLPKN
DANEEVEEKEGEAEEKDKDKTNASSEVESTEPNGEAALAAAAAAATAGMSTNALAFNPFL
LSTMAPGLFYPSMFLPTGLGGLGLPGFSPTSLADLQNAMNGALGATSENRESTKRPEPDQ
DKPAAATTADTTIENSDSEESQNKTAESSALDEDIAGPAEELDSLEGGEEDDDDVDDDDD
DDDDDDDDDDDDDVPEEDGDKSD
NT seq
9432 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctagtatgatgagcctttttggggatgatgggaatctgttctcggatgaa
ctggagagtctgggggattgtggttacccaccacaggcccaagccaaccctatgggccca
gccatgggtcatgatcatcaggcttatggaccgctctcctctagcattcacatgcctcca
caggccgttcctggccagccaaagctgggaccacctccaacccaccactatgatcatttc
agccagtatgagcagccacagagtggtcgcatgctagccaatggccctgtaaatggcatg
tcctcccctcagtcccgctaccattctgcttctacaggacctgcaccacctggacaccat
ggatatcctggcccacaggcggatgcccgagcccaggcttttagtgatgggagtggcggt
acttggggccccccgccacaagtagtgcaggtgtccgaacagggccgccctccgttccag
ccgcaacagcaagcagcccagtcccaacatggaggctctggccctcaaggccatgggagt
catcagatgagcccttacatgggccataatgactacacaattccaggtcatggacaaacg
caaactcctccccggatgaaccattttccacagagtttgccacaggagcccagtcacttc
atgggccatgttggcctccaacagagttccaatattggtggaccccctggggcacccccc
atgaggcacccagcccagcagcctccgaggcacccacaggcccctcagcaattcctccac
cgacccaaccaggctgggcaccggtctgatgctgttcctagtgctcataatgctcaatat
ccacccagtccttcaaggcagcagcagcctcagcagcaacaacaggtgattcctggaaga
gcacaccccaacttgggctacaacatgcacagccagcctgtgactccaaacactgtaacc
agctcaggacagtaccctccctaccctccatacggcaaccttaatcagggattagccaac
ccttcagggatgagtcccagcatgagccttaacaccagcagcagctatcctagccagggt
ggcccaccaccccagcagccaagatacccgcctactggcgggccccagcagggaccaatg
caccagcagcagcagcctgctctccaccagatgaaccaaatgaacgctcagcctatgcac
ccgggccagaactcctctgcagcccagcagaagctccagccgcagcagaagcaacagcat
ctgcctcagggatcctatggttcacccccctcaatgtcacctatgaggaacttgagcact
cctgctggcacaccacctccccctcagcatagtcgccctcccagcacaggcctgggtcca
gacatggttgctgcaggtggttaccctggtgtccctcagagtgcagcaggcaacatgccg
cttcctcagagggtccagcagataccccacccccagcagcagcagctctccacacaggtg
tacaaccctctgtcacccaaccacagagcccagggcagaaccaccaacccgagccatgag
ttgcctccacaacaggggccaccagaccagagactgcatcctcagcagctgcagtcacct
ccaatgcctttccagcagcagcagctgcagcaggtgtgccctccttctgctgcactgccc
ccaccccagcagacacacctggctgctatccatcagaactctcctccctcacagcagcct
tgggcgccaccacaccagtcaactccacccagccagaaagtgcctctaatgcagcattcc
ccatcagaacctccagtagaggtgaccacacccagcgggcctcccacctctgcctgtggc
caaagccctcagccaaccaactgtgaccagcagcagatggaaagcaaccagaagccaaaa
aagaaaaagaagaagaaagccaaggtgagtgagactgaggacggggagtccggcagtgtg
gagaaagaccctgaggctgtgttgagcccggatgcaacccagacccaccctgcacagaag
aagagtaagaagaaaccaaaggagaaggagcccaagactcccaaaacacccaaagagctc
aaggagaagaaggctaaggcaacatccacccctaaagccaagagctccaagaagccaagc
acgaagaagtcagactctgatagtggtttgggcaccaagaaggaagccaagcggaagagg
gagccatctgtcaactcagacactgagaagacaccacctccctctccagaggaagaggag
gaggatgatggtgttcagaagagacggtccagtcgtcaggtaaagagaaaacggtataca
gaggaccttgagttcaagatttctgatgatgacgatgaccactccactggtcccaaatcc
ccttccaatgcctctgaacagcaggaggtgcctgatacagaggggcctgttgttgagaag
atcatggggatgcgtgctgtcaagaaagagttggagtctggagaagtggaagtggaagag
ttttatgttaaattcaagagtttctcttatttgcattgtcgttgggcagatgtggaggaa
cttgaaaaagacaaacggatccaccagaaagttaagaggttcaaggccaaacaggccctc
agtaactttcttactgagatggatgatgaaccctttaacccagattatgttgaggtggac
agggttttagatgtgtctgaatcaactgatgagaatggagagcctgtgattctatacctg
gtgaaatggtgctcccttccctatgaggacagcacatgggaactgaaggcagacattgac
cagagcaagattgaggagttcgaacgagtgatggcaagggaaccagagctcaaacgtgtg
gagcgacctcctgccagcgactggcagaaatccgagagttccagggaatataaaaacagc
aacacactcagggaataccagctggagggagtgaactggctactcttcaactggttcaac
acacggaattgtattcttgctgatgaaatgggtcttggaaaaaccattcagtccatcaca
ttcctccatgagatctacctgaagggaatccatgggccatatttggtcattgcgccactg
tcaaccattccaaactgggagagggagttccgtacgtggactgagttgaacgtagtggtt
taccatggcagccaagccagccgaagaaccatccagacctatgaaatgaactacagagat
gcacagggcaaggtgataaaaggagcctacaaattccatgccgtcatcaccacgtttgag
atgatcctgaccgattgcccagagctgcgcagtgtgccatggcgctgtgtcatcattgat
gaggcccatcgcctcaaaaaccgcaactgcaaactgctcgagggcctgaagatgatggac
atggaacacaaagttctgctgacggggactcctttgcaaaacactgtagaggagcttttc
agtcttctcaactttctggagccagatcgcttcccttcagagaccaccttcatgcaggaa
ttcggcgatttgaaaactgaggaacaggttcagaagctgcagggtatcctgaagcccatg
atgcttcggcgtctaaaggaggatgtggagaagaacctggctcccaaggaagagaccatc
attgaggtggagcttaccaatgtgcagaagaagtactaccgtgctatcctggagaaaaac
tttacctttttgtcaaagggtggaggtggaggtggaggaggtggtggtggtggatccagt
gtacctaacctgctgaacacaatgatggagctgaggaaatgctgcaaccatccctacctc
gtcaatggtgctgaagagaagatactggaagaattcagagaaagtcactccactgaacac
tcagatttccagctccaagctatgatccaggcagcaggcaaactggtgcttattgacaag
ctgctgcccaagctgaaggccggcggtcaccgtgtgctcattttctctcagatggtgcgc
tgtctggacattttagaggactacctcatccagagaaggtacccatatgagcggattgat
ggcagagtgaggggaaaccttcgccaggcagctattgaccgcttttcccggcctgactcg
gaccgcttcgtgtttctgctgtgcacccgggctggaggtctgggcatcaacctgactgct
gcagacacctgcattatatttgactctgactggaacccacagaatgaccttcaagctcaa
gctagatgccacagaataggacagagcaaggctgtgaaaatctatcgcctcatcaccagg
aattcttatgagagggagatgtttgataaagccagcttgaagttaggactcgacaaagct
gtgttacagtcaatgagtggcagggagaacgctgctaatggggttcaacaactttccaag
aaggaagttgaagatctcctacgtaagggagcatacggagcactcatggatgaagaggac
gaaggctccaaattttgtgaagaagacattgaccaaattttacagagacgcacacagacc
attaccatcgaatcagagggcaaaggttccacttttgccaaggccagctttgtgtcctct
ggaaacaggaccgatatttctctggaggacccagatttctggcagaaatgggcaaagaaa
gccgagctggacctggatgctattaatggaaggaacaacttggtgattgacacaccacga
gtgcggaagcagactcgccattacagttccatgaaagaagatgagctgatggagtactct
gagctcgagagtgactctgaggacaagccagtggccaaacccagaagaccacaggaccgg
gctcaaggctattcacgtagcgagtgttttagagtggagaagaacctgcttgtctatggc
tggggccgctggagagatattctctctcatggtcgcttcaagcgtcctctgcgggagcgg
gatgtggaaaccatctgccgtgctctgctggcctattgcctgctgcactaccgtggtgat
gagaacatcaagagcttcatctgggacctcatcacacccactgaagatggccagagccgc
acactctcaaatcactctggcctgtctgctcctgtgcctcgaggacgtaaaggaaaaaag
ggcaagtgtcaggccccccagactcacacacctcaggcagattggctggctgactgcaac
cctgatgttctgctgcaggaggatagctacaagagacatctcaagcaccactgcaacaaa
gtcctgctacgggtgcgcatgctgtactatctacgacaggaagtcattggagaccaagcg
gaccgcatcctggatggagcagattccagtgagctggacatttggatcccacagcccttc
cacgctgaagtccccgctgattggtggaacagtgaggcagataaatccctccttattggt
gtcttcaagcatggctatgagaagtataactcgatgcgagccgaccccagtctgtgcttt
ctagagcatgttggcatgcctgacgccaaagctattgctgctgagcagaggggagcggac
atgatggcagatggagtagaaggggaggatgaagaccctgagtacaagccagtgagaatg
ccattcaaagatgatatggatgattttaccaactctcctcttgatgataaagaggagaca
atggatgtggaaagtgaagttaaagcaggggacagctataaggcggggaacctgtattgg
cccctagcctcagctctgactgctcgtcttcgccgactcatcacggcataccagcgtaca
cacaagagggaacagcttcgacaagaagcccttgccaagcctgaccgccgccgccgccgt
tttcgtgaggaccttctggctgtggctagtgaggtcggcgcctatgcagcgccagaggtg
ggcagttttctggcagaaggtgggccgttcatgactaaaggctcgcccttcatcccagag
ggggcagccctcacgggtgacgctggagcgttcttcaaggaaagaaggcagagatggact
cgtcgtgaggaagctgacttctaccgagtggtgtccacgtttggtgtagtctacgatgtt
gctcagcagtgctttgactggagtcagttccgtgcctttgcccgccttgataagaagact
gatgagagtctggagaaatactacttctcctttgtggccatgtgcaagcgtgtatgtcgc
atgcaggccaaaactgacacagacctggctgatcccaccctaatcattgacccaatcact
gaagagcgtgcgtcacgtacactttatcgcattgaacttttgcgacggatccgtgagcag
gtcctacctcattccatgctggaggagagactgctcctatgccagcccagcccagagctg
cctgcctggtgggagcctggccgccatgacaaggacctgctacgtggagcttccaagcat
ggtgtcagccgcacagactaccacattctgaatgaccctgagttgagctttttggaggct
caccgacgtttctcccagccaccgggaacctctctcaatccaccaagccagaataccccc
tccagcttgcctaaagatgagcaggtagaagcagtcaaggacaaggagcagccggaggct
attgcaacctcctgtaaagcagagaagagtgactctgagcgagaagaagttaaggaggag
gtgaaatcaggtgcagcctcacctaaagaagtagtgaaggaagaaaatgaggaggaagaa
ataaaggagctgaaggaggaagaaattgaagaaatggcagttgagaaggcacaggaggat
gaaaagagtgcccctgaaaaggacggtgaggagaagacccttgtcaagcagcctgtggaa
gaattgcttgagtccaaagaggagcaaagcccagctgcagaaaaggaacctctgactgag
ggggaggtcacatccgagagaggctcagaaaagctctcggaggaggaggaagaggagaaa
attgatgacgacaaatcagagaaatcatctcaggcagaagttggagtgacttctgacagg
aagaactttgatgaggaaagcaatgcatccctgagcacagctcgggatgagacgcgagac
gacttctgtgctgatgatatggaagggtcaacagctcagacgctctctgaccgcccgctt
acctttgctttctggcctaaggaccggattatgatcaaccgtatggacaacatctgtgaa
gcggtcattaagggtaaatggcccaccaacagaaggcagttctttgatttcccaggcctg
ttacctggttacagctctatgatggtggacagccctctacagaggaggagcctgggagat
ctgtccatgagtgggcagacaagcttcaacggtagtgatgacctcaccaagtccccaacg
gtcagcaagaaggatggttctaaagcgcctactccctctgtgcaggacgaggccctgagt
ctatcagtcccgcgtcggcggcggcgacgcaggaaggtggagattgaggccgagcgtgct
gccaaacggcgtaatctcatggagatggtggcgcagctgcgggagtctcatgcctctgat
gaccaggcccatgccatggacctgactaaagctctgcatggtctaccagccccttcctct
tcctcaaccttttctgctggcctggccgcctcctcttctgctgccctgaaggcccagatg
gagctgctgcaggcaggcacactggggcggccacgggccaatggctccctactggatata
gaactgcccacacgtcgcagaaggggccgcaggaaaaatgtggagggcttggagctccta
ttcatggggaacaagagggctgcagaaagtgctgatgatactgagcggaccaaagcattg
gaggagggtggtggctttccagcacgggcccccaaacacattccttctgctggcaacaag
ggccctggcagggggcgggaggagggagaggacggccccagcaccaaggacctgagggaa
tggctacgacaacaccccacctacaccatggatatgcctggatatgtaccaaagagtgaa
gaactgcttctgtcacagtttcctaaacctaagcaaaagaggcatcgctgccgcaacccc
aacaagatagacataaatacactaaccggtgaagagagggtaccagtagtgaacaagcga
aacggacgcaagatgggaggagccatggcacctcctatgaaggacttgcccagatggctc
atggaaaaccctgagtttgctgtggctcctgactggactgaaattgtcaagcagtccggc
ttcctccccgagtccatgtttgaccgcctcctgactggtcctgtcgttcgagaagaaggt
gttcgccgtcgaggcaggagacccaaatcagagattgccaaggcaacagcagctgcagca
gctcaggcagcagcagcagcagcttccactaccggtgtgaaccctctactgatgaatggc
ctctttgggggtatggacctcaccagcttacagggcctgcagaaccttcagagccttcaa
ctggctgcagggttaatgggctttcctccagcactgagtggggttggagatggcaagcat
tcagcctcacccatgctgcccctcatgctgcctggtatggggggcctccctaatatgttt
ggcctgagcagtctgttcggagctgccgctgctgccacagcatctccttctaatggaaac
aactccactgtgaacaccaatgaacagggagacacggatgcaaaaaccctgcccaagaat
gatgccaatgaagaggtagaagagaaagagggtgaggctgaagaaaaggacaaagacaag
actaatgcttccagtgaggtggaatccactgaacctaacggagaggcagcattggctgca
gcagctgctgccgctactgcgggcatgtccaccaacgcactagcttttaatcccttcctg
ctttccaccatggcccctggcctcttttatccctccatgttcctcccaacaggcctggga
gggctgggcctgcctggcttctcccccacctcactggctgatttgcagaatgctatgaat
ggagcactgggagctacaagtgaaaacagggaatccacgaagcggcccgaaccagaccaa
gacaagccagctgctgcaaccactgcagacacaaccattgagaacagtgactcagaggag
agtcagaacaagactgcggagtcatcagcactagatgaggatatagctggaccagctgag
gaactggactccttagaaggaggagaagaggatgacgatgatgttgatgacgatgatgat
gatgacgacgacgacgacgacgacgacgacgacgatgatgttcctgaagaggatggggat
aaaagtgattag
DBGET
integrated database retrieval system
