Alosa sapidissima (American shad): 121723535
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Entry
121723535 CDS
T11137
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03320
PPAR signaling pathway
asad04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121723535 (pparab)
03320 PPAR signaling pathway
121723535 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121723535 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
asad03310
]
121723535 (pparab)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121723535 (pparab)
Nuclear receptors [BR:
asad03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
121723535 (pparab)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121723535
NCBI-ProteinID:
XP_041965237
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Position
11:complement(35521159..35559711)
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AA seq
468 aa
AA seq
DB search
MVDMESHYCPPSPLEESVLGSPLCGDFIGSIEDLQDISQSIDDDALSSFDVPEYQSSSLG
SGSESSTMLDALTPASSPSSGVYGTVPGQEEFSSTSLNLECRVCADRASGYHYGVHACEG
CKGFFRRTIRLKLEYEKCERHCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQSEK
LKLKAEILTGDRDVGDPRVADQKTLAKQIYEAYLKNFNMNKSKARTILTGKTSTPPFVIH
DMETLQLAEKTLVAKMVGSAAGSLQHKEAEVRIFHCCQCTSVETVTELTEFAKCVPGFSG
LDLNDQVTLLKYGVYEALFAMLASCMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPKF
QFAMKFNALELDDSDLALFVAAIICCGDRPGLVNVAHIERMQEGIVHVLRLHLLANHPDD
AFLFPRLLQKLADLRQLVTEHAQLVQEMKKTEDMSLHPLLQEIYRDMY
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtagacatggagagccactactgccccccgtctcccctggaggagtcggtgctgggc
agcccactgtgtggggacttcatcggcagcatagaggacctgcaggacatctcccagtcc
attgatgatgacgccctcagctccttcgacgtgcccgagtaccagtcttccagtctgggc
tccggctctgagagctccaccatgctggacgccctgacgccggcgtccagtccatcctca
ggtgtgtatggaacggtccccgggcaagaggagttctcctcgacctcgctgaacctggag
tgtcgcgtgtgtgccgaccgcgcctcgggataccactacggcgtccacgcctgtgagggc
tgtaagggtttcttcaggagaaccattcgcctcaagctggagtacgagaagtgtgagcgg
cactgcaagatccagaagaagaaccgaaacaagtgccaatactgccgcttccagaagtgc
ctgtccgtgggcatgtcccacaatgctatccgtttcggccggatgccccagtcggagaag
ctgaagctgaaagcggagattctgacgggggaccgggatgtgggggatccgcgggtggct
gaccagaagacgctggctaagcagatctacgaggcctacctgaagaacttcaacatgaac
aagtccaaagcaagaaccattctcacgggcaagaccagcacaccgccctttgtcatccat
gacatggagacgctgcagctagctgagaagacgctggtggccaagatggtgggctcggcc
gcgggcagtctccagcacaaagaggccgaggtgcgcatcttccactgctgccagtgcacc
tccgtggagacggtcactgagctgaccgagttcgccaagtgcgtgccgggcttctcgggc
ctggacctgaacgaccaggtgacactgctcaagtacggcgtgtacgaggcgctcttcgcc
atgctggcctcgtgcatgaacaaggacgggctgctggtggcctacggcagcggcttcatc
acgcgcgagttcctcaagagcctgcgccggcccttcagcgacatgatggagccgaagttc
cagttcgccatgaagttcaacgcgctggagctggacgacagtgacctggccctgtttgtg
gccgccatcatctgctgcggagaccggccgggcctggtgaacgttgcgcacatcgagcgc
atgcaggagggcatcgtccacgtgctacgactccacctgctggccaaccacccggacgac
gccttcctctttcccaggctgctgcagaagctggccgacctgaggcagctggtgacggag
cacgcgcagctggtgcaggagatgaagaagacggaggacatgtcgctgcaccccctcctg
caggagatctacagggacatgtactga
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