KEGG   Alosa sapidissima (American shad): 121723658
Entry
121723658         CDS       T11137                                 
Symbol
polr1e
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49 isoform X1
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:asad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121723658 (polr1e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asad03021]
    121723658 (polr1e)
Transcription machinery [BR:asad03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     121723658 (polr1e)
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 121723658
NCBI-ProteinID: XP_041965496
LinkDB
Position
1
AA seq 422 aa
MAASSYTWKCCEEEKEDDNVAVLQFSNGNVTNTDQLDFNYYKNVLASNPRKRNRRILVAE
SNRLSYVGNNFGTGSLRCNNMCKYYVGVLDKTSMQMEVHSAQLFNMQPLIPGESMPADEP
DTKKSYRHKVDSLIEAFGTTKQKRALSSRRNNQVADDSLQQAVAQAASNIIEQKGIEVLQ
QEVADSEALTDTVLYLPVCNPEADTEEDVYPFNELLSDVEYAALEPVGKKMAGLTSEELL
KMREQGCPQTVMRHLEAMPVDPEARDRQARCLWYLSLLIKVAHQKFISRKYFHIHVSVGS
EDDCPKIIINKVMKTFTVESFSHGRVKNVVASSMRIKLASYCLALLLHINHQTANLTRLH
QDLGLHDSRMIEVAKSMGLKLSKMPAECADQAGFDEHRIATLQLPLMKYERFTQTKKHKK
LR
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcggcttccagttacacatggaagtgttgtgaggaagagaaagaggacgacaatgtt
gcggtcttacagttctcgaatgggaacgtgacgaatacggaccaactggatttcaactat
tacaagaatgtacttgctagcaacccaagaaaaaggaatcgacgtatcctggtggcggag
tctaacagattgtcatatgtagggaacaacttcggcacaggatctttgcgatgcaacaac
atgtgcaagtactatgtgggagtcctggataagaccagcatgcaaatggaagtgcacagt
gctcaactcttcaacatgcagcctctcattccaggagaatccatgcccgctgatgaacct
gacaccaaaaagtcttacagacataaggtggattctctgattgaggcatttggaacaacg
aaacagaagcgtgcactgagctctcgtcggaacaaccaggttgctgatgactctctgcag
caggctgtggcccaagctgccagtaacattattgagcagaagggcatagaagtcctccaa
caggaggtggcggattcagaggctttgacagacacagtgctgtacctgcctgtgtgtaac
ccagaggcagatacagaggaagatgtttacccatttaatgagttgctttctgatgtagag
tatgctgcgctggagcctgttggaaagaaaatggctgggctcacctcagaagagctgctt
aagatgagagagcagggctgtcctcagacagtgatgcgacatttggaagcgatgccagtg
gatccagaggctcgtgacagacaggccagatgtctgtggtacctctccctgctcattaaa
gtggcacatcagaaattcatctcccgcaaatattttcacattcatgtttcagttggttct
gaggatgactgtccgaagatcattataaataaagtgatgaagaccttcacagtggaaagt
ttcagtcatggcagggtcaaaaacgttgtggcttcctcaatgcgaataaagctggcctca
tactgtttggctctgcttctacacataaaccaccagactgccaatctcacccgactgcat
caggacctgggcttacacgacagcaggatgattgaggtagcaaagtccatggggctgaag
ttgagtaagatgcccgcagagtgtgcggaccaggctggatttgatgaacacaggatcgcc
actctacagctccccctcatgaagtatgaacgatttacacagactaaaaaacacaagaaa
ctcagataa

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