Alosa sapidissima (American shad): 121723824
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Entry
121723824 CDS
T11137
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-4-like
KO
K04815
nicotinic acetylcholine receptor beta-4
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121723824
04082 Neuroactive ligand signaling
121723824
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121723824
Ion channels [BR:
asad04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121723824
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF1286
DUF2417
DUF2391
Motif
Other DBs
NCBI-GeneID:
121723824
NCBI-ProteinID:
XP_041965898
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All DBs
Position
11:23050270..23055524
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AA seq
504 aa
AA seq
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MELLSTLLLCLSCLIPSGGGQSAEERLMSWLLGEDRYNKLIRPAANRSERVTVSLQVSLA
QLISVNEREQIMVTNVWLTQSWQDFRLTWDASKYEGITKLRVPSKHLWLPDVVLYNNADG
EYEVTVYTNAIVFASGLVYWLPPAIYKSSCRIEVKHFPFDRQNCTLKFRSWTYDHTEVDL
VLRTKMATMDDFTPSGEWDILALPGRRTVNPSDPTYVDITYDFLIRRKPLFYTINLIIPC
MLISTLAILVFYLPSDSAEKITLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLTFTL
VLVTFSIVTSVCVLNLHHRAPSTHTMPRWVRQVFLVSLPALLFMRRPQNHSAQQRLRRCR
TGGREQPTAGPRMEDDSWDSASATAAASSSSSSGSLGSSTEVDTQVDPAYRFKHDDVQRS
SGLLGEQRGEPEQDPAVERALHGLEFISQCLLGEEEDQLVNEDWKFVAMVVDRLFLWVFV
IVCVAGTLGLFLQPLSQQDAIPLS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaactgctttcaaccctcctcctctgcctgtcctgtctcataccaagtggaggaggc
cagagtgcagaggagcgcctgatgagctggttgctaggggaagatcgctacaacaagctc
atccgacctgcagccaaccgcagtgagcgggtgactgtcagcctgcaggtgtctctggcg
cagctcatcagtgtgaatgaaagagaacagatcatggtgaccaatgtctggcttacacag
agctggcaggacttcagactgacatgggacgcctctaagtacgaagggatcaccaagctc
agagttccctcaaagcacttatggcttccagatgttgttctgtacaacaacgccgacggg
gagtacgaggtgacagtctacaccaacgctatcgtgtttgccagcggactggtgtactgg
ctgcctcctgccatttataagagctcctgcaggattgaggtcaagcacttcccttttgac
cggcagaactgcaccctcaagttccgctcctggacctacgaccacacagaggtcgacctg
gttctccgcaccaagatggccaccatggacgacttcactcccagtggagagtgggacatc
ctggccctgcccgggaggcgcacggtcaacccctcagaccccacttacgtggacatcacc
tacgacttcctgatccggaggaagccgctgttctacaccattaacctcatcatcccgtgc
atgctcatctcgaccctggccatcctggtgttctacctgccgtcggacagcgcagagaag
atcaccctctgcatctccgtgctgctggctctcaccgtcttcctcttgctcatctccaag
atcgtgccacccacgtccctggacgtgccgctcatcgggaagtacttgaccttcaccctg
gtgctcgtgaccttctccatcgtcacgagtgtgtgtgtgctaaacctgcaccaccgcgcc
cccagcacacacaccatgccccgctgggtcaggcaggtgttcctggtcagcctccctgcc
ttgctcttcatgaggcgcccgcagaaccactccgctcagcagcggctccgcaggtgcagg
accggcggaagggagcagcctacggcggggcccaggatggaggatgactcgtgggactcg
gctagcgccaccgcagccgcctcctccagctcgtcctccggctcgctcggctccagcact
gaggtggacactcaggtggaccctgcttacaggtttaaacatgatgacgtgcagaggtcc
tcagggctgttgggagaacagcgtggagaaccagaacaggaccctgcagtggaaagagcc
ctgcatggcctcgagttcatctcccaatgcctgctcggggaggaggaggaccagctggtc
aacgaggactggaagtttgtggccatggttgtggaccggcttttcctgtgggtctttgtg
attgtgtgtgtggctggaaccctgggcttgttcctgcagcctctctctcagcaggacgcc
atccccctcagctga
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