KEGG   Alosa sapidissima (American shad): 121723900
Entry
121723900         CDS       T11137                                 
Name
(RefSeq) Fanconi anemia group A protein isoform X1
  KO
K10888  fanconi anemia group A protein
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:asad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    121723900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asad03400]
    121723900
DNA repair and recombination proteins [BR:asad03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     121723900
SSDB
Motif
Pfam: Fanconi_A_N FANCA_arcN FANCA_helical FANCA_CTD
Other DBs
NCBI-GeneID: 121723900
NCBI-ProteinID: XP_041966036
LinkDB
Position
11:10620002..10649061
AA seq 1468 aa
MSLEASSVLAPSQKTSLSSLLASRAGKRPREHLSGEELQEAAIQLLNSNQNLSDLLLEVG
QHSPKFGKVDHYWDSGERDAFDHRPDPVQKTGASFLLSELKRQSQELGVPVGVLSVKVVL
ERVLELTTERDEDHVLLTSAQRAQLCVLLQSTRELLSLGTFSPRLLWQEYWKAQPKLEVI
YHLHAENILALEDLFESNDDVGSWLVKKFQALCGLLPSQEEEELTKQKILSTVMCALVRG
GFEEAQDTASSSRRFPQRCCSVLDNMLSWLLDSLSSSQGPQEQEEGKAAAMAWVGVFEAC
VSHASVLGQALRRFSTRSLTHILTHCPRLKVSDAIAMQNNWTFAKTNPLLTSLFCKLCVL
FSMEELLSHLQQVLETHEVNWQHVLSCLSTLLVYHSDGQPCLKEMLSRLLSLAFEAYDLE
SMITAFLLARQGALEGSALFPSYSDWFKLAFGGASGYHGNSKKSLVFLLKFLSDLVPFDP
PQYLKVHILHPPYVPAKHRALLQEYVSLAKTRLADLKVSVEEMGLYEDVTGAAPTVQPQH
QAQQDVEKAISLFESTGKISAMVMEASIFRRPYFLSRFLPALLTPRVLPVKADARMNFIE
ALRRADKIPSAVYSSYTDSCHSESQRQQCGVVRPLEGSEAVLAVLRSQLQELRRLLSSGA
NHGDVSAQLARISDTLSGASPEPPEEAVGHHVIQLQTGTLCSNELQTRLVNALLRGFCQC
LLDASKANPPNRQGTWAAQFVKLLLGHRRLLISLLHRLWDLLPQQGPSLGAAHVLGLAAL
LVQLHAAGPLCPMVQLPSSSPTTSSSPSSSSSLDPCGPLPVSEALNAALLSHTSDHMNFS
LRFCVAAVSYGLCSSHPEGVQQCIPSGLYKKLVYLVPRLVAEARAEGGCKGRGQPEHLQP
GGGAEEPGVWSRLTDPTVTLTASVLELWRYGPFRSLQKLPAYQLSFPEWLALELRVQRSQ
DALSDPQRQEYEQWACEQLYLPTALGQGGCGGDVQSACTHILNAVMDMSTRPQSWLSPDH
SVPLTDTCLPDVLSRLQEMVCELQMTLRFQSSGRADGHFLFDVVAGRCSKSPDSQDLGSE
LSLQQTLHTWNRVILALPALSLIPVKTEGAKRSLECQPLIEHVNLYQRKVCSPAGLLPYP
LTAHFLRGIVGASMCCERPAASINRAVSQISQQCPLLLASAGHWWGHLSPVLGSQWNRGS
DGDFLPEKLQQLADCHSWACRWVSSSTGQSEVPFAPALLLAACLHQQWTSGLDISPRSSP
ERLAQLQQHHRPVLVFLLFFCMSDLLTAYLGPQGAESVKQAQQQCCDILTLLVDSADWLH
LFHSQSTEQNQYQCATIISTEENNRLMPLAFYSLVPSLDAAVLNSAVSAPRFLYTAVLSY
CKLLQLFLDGETPKPRPVSPPQQMDVSQVLSRAQQVLLKIIILSSPGCLTHTQRTELEEL
CGELDPEVAATLSMQLSPPDLSQEMDFL
NT seq 4407 nt   +upstreamnt  +downstreamnt
atgtctttggaggcgtcaagtgtgttggcaccatcgcagaaaacgtcgctgtcatctctt
cttgctagccgcgctgggaagaggccgagagagcatctgtccggagaggagctgcaggag
gctgctattcagctgctcaacagcaaccagaacctgtccgatctgcttctagaagtgggg
caacacagtcccaagtttgggaaagtagatcattactgggattcaggagaaagagatgca
tttgatcaccgccctgaccctgttcagaagactggagcttctttcctcttgagtgagctg
aagaggcagtcacaggagctgggggtccctgtgggtgttctctcagtcaaggtggtgctg
gagagagtgctggagctgaccacagagagagatgaagatcatgtactcctgacctcagca
caaagggcccagctctgtgtgttgcttcagtctacaagagagctcctctcacttggaacc
ttcagtcccaggcttttatggcaggaatattggaaagcacagcctaagcttgaggttatc
taccatttacatgctgaaaacattcttgccctggaagacctctttgaaagtaatgatgat
gttgggagctggttggtgaagaagttccaggctctgtgtgggttacttccatcccaggag
gaggaggagctgaccaagcagaagatcttgtcaactgtcatgtgtgctctggtgcggggt
ggctttgaggaagcccaggacactgcttcatcttccagaaggttccctcaacgttgttgc
tccgtgctggacaacatgctttcctggctgctggactcgctgagctccagccagggccca
caggagcaggaggaggggaaggcagcagcgatggcctgggtgggagtgtttgaggcctgt
gtgtctcatgcctccgttctcggccaggctctgcgtcgtttctccacacgctccctcaca
cacatactcacccactgcccacgactcaaagtgtcagatgcaattgccatgcagaacaac
tggacctttgccaaaaccaaccccctcttgacgtctctgttttgtaagctgtgtgtgttg
ttcagtatggaggagctgctctctcatctgcagcaggtgctggaaactcacgaggtcaac
tggcagcatgtcctttcctgtttgtccaccttgctggtgtaccactcagatggacagcca
tgcctcaaagaaatgttgtctagactcctgagtttagcatttgaagcctacgacctggag
agcatgatcaccgccttcctgctggctcgccagggggcgctagagggctcagcattgttc
ccctcctacagtgactggtttaagctggcctttggaggtgccagtggttaccatggcaac
agcaagaaatcgctggtgttcctgctgaagttcctgtctgacctggtgccctttgacccg
ccacagtacttgaaggtgcatattctacaccccccgtatgttccagccaagcaccgcgct
ctcctgcaggagtatgtgtcccttgctaaaaccagactggctgacctgaaggtgtcagtg
gaggagatgggtctctatgaggatgtgactggagccgctccaactgttcagccccagcat
caagcccagcaggacgtggagaaggccatctctctgtttgaaagcactgggaagatttct
gccatggtcatggaggccagtattttccggaggccctacttcctgtctcgcttcctgccc
gccctccttactccacgagtgttgcccgtcaaggcagatgccaggatgaactttattgaa
gctctgcggagggcggataagatcccatcagctgtctactcatcatacacagactcctgc
catagtgagagccagaggcagcaatgtggtgtggtcaggcccctggagggcagtgaggct
gttctggcagtgttgcgctctcagctgcaggaactccggaggctactgtcctcaggagct
aaccatggagatgtgtcggcccagctggcccggatctcggacacgctgagcggagcgtcc
cccgagcccccagaggaggcggtcggacaccacgtcattcagctccagacggggacgcta
tgttccaacgaactccagaccagactggtgaatgccctcctgaggggcttctgtcagtgt
ctcctggatgcctctaaagccaatccccccaacaggcagggaacgtgggcggcccagttt
gtgaagctcctgctgggccacaggcgtctgctgatctccctcctgcaccgcctctgggat
ctgctgccgcaacagggtccctctttgggtgcagctcacgttctaggactggctgctctg
ctagtgcagcttcatgcagccggacctctgtgccccatggtgcaactgccttcatcctcc
cccaccacctcttcctccccctcctcttcctcgtccctcgatccgtgcggccccctgcct
gtgtccgaggctctgaatgcagccctgctgagccacaccagtgaccacatgaacttcagt
ctgcggttttgtgtggctgctgttagctatggcctgtgcagctcccatcctgagggtgtc
cagcagtgcatccccagcggcctctacaagaagctggtgtacctggtgcccagactggta
gcggaggcacgggcagagggaggctgcaagggccgaggccagccggagcacctgcagcct
ggagggggcgccgaggagccgggggtgtggagccgcctcaccgaccctacagtcactctc
accgcctccgtcctggagctgtggagatacgggcccttccgctccctgcagaaactgcca
gcctatcagttatcttttcctgaatggctggcccttgaactccgagtgcagcggagtcag
gatgccctttctgacccacagaggcaggagtatgagcagtgggcgtgtgagcagctctac
cttcccaccgcgctgggacaggggggctgtggaggagacgtgcagagcgcctgcacacac
atcctcaacgcagtcatggacatgagcaccagaccccagtcctggctgagtcctgaccac
agtgtcccgctcacggacacctgcctcccggatgtcctgtccagactacaggagatggta
tgtgaactgcaaatgactctgcgctttcagagttcagggcgagcagatggacacttcctc
tttgatgtggttgccgggagatgctccaaaagccccgactcccaggacctcggcagtgag
ctgagcctgcagcaaacacttcacacctggaacagagttatcctggccttgccagctcta
agtctcatcccagtgaaaactgaaggagccaagaggagtctagagtgtcagcccctcata
gagcatgtgaacctgtatcagagaaaggtgtgtagtccagctggactcctcccctatcct
ctcactgctcacttcctcagggggattgttggtgccagtatgtgctgtgagcgtccggct
gcatccatcaatagggccgtgtctcagataagccaacagtgccctctgctgttggcctcc
gctgggcactggtgggggcatctttcacctgtgctgggctctcagtggaatcgggggagc
gacggagactttctgccagagaagctgcagcagctggccgactgccactcctgggcttgc
aggtgggtgagcagcagcaccggtcagtctgaagtcccatttgcgcctgcgctcctgttg
gctgcctgtctgcaccagcagtggaccagtggcctggacatctccccccggagcagcccc
gagaggctggcccagctgcagcaacaccataggccggtgctggtgttcctgttgttcttc
tgcatgagcgacctcctgactgcttatctcggtcctcagggagcagagagtgtgaagcag
gctcagcagcagtgctgtgacatcctgacattactggtggactctgcagactggctgcat
ctattccactcccaaagcactgagcaaaaccagtaccagtgtgccaccattataagtact
gaggagaacaacagactgatgccccttgcattctacagcctagtgccctcgctggatgca
gcagtgctgaacagtgcagtgagtgctcccaggtttctctacacggccgttctgagctac
tgtaagctgctgcagctcttcctggatggagaaaccccaaaaccccgaccagtgagccct
cctcagcagatggatgtgtctcaggttttgtccagggctcaacaggtcctcttaaagatc
atcatcctgagctcaccaggctgccttactcacacccaaagaactgagctggaggaactg
tgtggcgagctggacccagaggtagcggctaccctctccatgcagctgagtcctccagac
ctgagccaagagatggacttcctgtga

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