Alosa sapidissima (American shad): 121723905
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Entry
121723905 CDS
T11137
Symbol
lrrk2
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 2
KO
K08844
leucine-rich repeat kinase 2 [EC:
2.7.11.1
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
asad01001
]
121723905 (lrrk2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121723905 (lrrk2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asad04147
]
121723905 (lrrk2)
Enzymes [BR:
asad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121723905 (lrrk2)
Protein kinases [BR:
asad01001
]
Serine/threonine kinases: TKL group
LRRK family
121723905 (lrrk2)
Membrane trafficking [BR:
asad04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
121723905 (lrrk2)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121723905 (lrrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_LRRK2
Beta-prop_LRRK2
ANK_LRRK2
Pkinase
PK_Tyr_Ser-Thr
LRR_4
LRR_8
Roc
COR
Ras
LRR_14
LRR_9
LRR_6
LRR_13
Gtr1_RagA
LRR_LRWD1
AAA_22
Beta-prop_EML_2
Arf
Ank_2
G-alpha
Motif
Other DBs
NCBI-GeneID:
121723905
NCBI-ProteinID:
XP_041966047
LinkDB
All DBs
Position
11:complement(12657879..12685473)
Genome browser
AA seq
2548 aa
AA seq
DB search
MVNKEELEERLKKLLVRLSNIQEGKQLSTMVQIMEDLLFLAHTDGCAAELFEGKNAHMPL
LIVLLSYTSSKGVQQAGWSLLCKLVEICPTTLEKLAQPLALSKEWEVLGVHQQILKVLAM
HITDCGVFTVTLRALAHLLRSPDILLQVLEEDVDVFDLIVEGMKSFPGSEELQLQGCRAL
QLLLERVSDEHLVDFVDRQDHSVVVRAAHEFRDNEDLLLHALRVLLPLADPPSNVEILMS
KKERCYSLISHSMLSFPHSEALQEVGCCLLQKFTSESYYNILVLNGIHGVTVTACLTYPE
NATLQASALTCLAALTKTIVLNKGLENATGEDEEEEEEEEGEAERHQMKGEEGGDLCWME
ASCRALELHTADAAVQQAACLALNSLLIHGSGLMWDHVCEEEEGRNPVQRKIMAAMLLHS
NCVGVFQATAVTLCNLIQRNGKIRGQLLSHGIHFNVVEIMKLHIHSTRVSSSGCRLLKQL
FQGWRASLDEATMAMNLILKAMVKHNFQLQVQLDGLQASLTFLSPDRSLQEHGMSVADPD
AEDVSLRVLKNQCVLEGAHTVYLEALNRFISNKDIQEYGLCVLSELAGCSGAVDLMCQQG
AIDTVLHTLQMFPRKREIHYWGLSLLVYLISKKKLSRTIVPVLASVLVQSMRQYMEDGEM
RMKGFRVAWKLMDTCSAAAAALESENFAREIFDQLRQHSSEQRSDSLHRLSCLCLSKMVA
DGEIKYTVLEKACEAEDLLMAECLILLGADINKKTKTESLIYQVCERGGPLALVELLLSA
GVHEQHLRGALGACVRRGDGPVVILLLGRLGLDLNNSALCLGGFRLGRLEAAWLSPLLSE
RRVPPSGHRRNCKGQSLARQIQLLQKKKGTVGSPGMLNDLSGYLSGEESDDSSHISLEDS
LVFTFEDIESDGSEGAHSVLKLCCDSPEEQRARSTPRQNGRPRHNSSEGGQVESDSQEFL
HKKLNRHVQNHRVLNSGESPSPSLSGGDREHIRLLDLSGNELDSLSCLMDSLTVQKQLEY
LQRLDLSQNALTKFPSSLCECLRRLTRLDLQGNQLQSLPAQILGLPALSVLNVSRNCVGP
VLTFDPAVCCPTLRQLNLSFNHITTFPSQLGYVMTRLEEFFLEGNQISALSGALCLSELK
VLDVSKNSIELISSDCLSECPRLETLNASMNKLSSLSHLPTKLTTLKFSNNDFTVVPDVI
VNLPNLQSVDMKNNQISVLPGPSAWASVNLREIMFSHNQIATLDLSGPAYKWARVEKLHL
CNNKLTEIPPQIGLLEELTSLDVSRNSGLRSFPDEMGKLGRLWDLPLDGLKLQLDLKHIG
NKTKDIVRFLQQRLKKAVPYHRMKLVVVGNGQSGKTSLMQQLMRLKRVQGHQGPSPASIH
VRDWSIRERDKKNMVLNVWDFSGGEEYSESNPHFMGPRALYLVVYDVSKGVSEVDAIKPW
LFNIKAVAPLSPVILVGTHKDKCDERQKEECFEKVREELIGQPGFPIIRDYHVVSIFDDA
DSVNRLRKAIVREVVNFKIQGQHVMGQLVPDSYVELERRLLRERELVVPEFPVLTHRHLL
QMIQESQLQLEEAELPHAISFLSETGILLHFDDPALQLGELYFIDPQWLCNIISQTLGLK
ICSGGEHLRGVVQRAVLEVFLTESRSFPKSLLTQYLKLLEKFQIALPLGQDQFLVPNSLY
EEKPIFDLPHCEHSEVIIRLYEMPYFPMGYWSRQINRLLEVSPFMLCGRERVLKPNRLYW
RRGIYLSWSPEAYCLVEADAVENGPANVIKITVPCSRKGRVLLGQVVDHIDSLLEEWFPG
LLTTDIHGNGETLLKKWVLYSFDDGQECNRMLLEEVLNHIDEDCLLVNSEDSRCTVPIAQ
ISPDLILSDQPASTMLNSEELEMDLSKEYLLGDGGFGSVYRAIYKNEDVAVKIFNKHASD
LYIHRLVRQELAVLGRLHHPSLVSLLAAGILPRHVLVMELAPLGSLDSLFEHENCSLNRK
LQHRIALQVADGLRYLHSSMIIYRDLKPHNVLLFNLKTDSEIIAKITDYGISQYCCSMGV
RSSEGTPGFRAPEVARGGVIYNLQADVFSFGLLLYDLLTCGERIADGMKFPSEFDEIAVQ
GKLPDPVKYYGCSPWPGFQILMKDCLKESPQDRPTSAQVFDRLNSGEMLCLMTEVTVYGM
PSECFTLSGDQGSQVWLGGGSCTQRLGCISSVDLQSEKSSSQEVDSSPVLCVVSVRIPGE
PCDWLVAGTQAGSLIVIDTSNPSSFHHLQKASDAVTSLFFHTHTPRSGLKNYLLIGTADG
MLVIYEDSVLKHKNGAPVKTVQVGNVNTPLVSLCQSTHSQDRSTVWAGCGTRVLSLTTDY
DVWKTIDTKHRQLTQKQHCGVSSDTNVSRLVVDKHVFLSKVGGQVVEVWDKKSDKTIDLI
DCAQLLRPNACRKPRRASSDMFGEMEPSWATVKALLVQHSTTLWIGTRAGHILLVELTNR
QLLQAISLHCHSVRSMASVLIETLNRKSVVMVLGKRQRLAQDQVRNQCDEDSVLMVWNST
LPLEVKDLSRHCELREEITAKMREQLFD
NT seq
7647 nt
NT seq
+upstream
nt +downstream
nt
atggtgaataaagaggagttggaggagcgactcaaaaagttactcgtgcggctaagtaat
atacaggaggggaaacaattaagtaccatggtgcagatcatggaggatctgctctttctg
gcgcacacggatggttgtgctgctgaactctttgaaggcaaaaatgcacacatgccactg
ctgatagtgttgttatcgtataccagcagtaagggagtacagcaggcagggtggtcactg
ctttgcaagctggtagaaatatgtcctacaaccctggagaagttggcccaacctttggct
ttatcaaaggaatgggaggttttgggggttcaccagcagattcttaaggtgctggccatg
catatcacagactgtggggtctttacggtaacattgcgagccttggcacatcttctcaga
tcacctgacatactgctgcaggttctggaagaagatgtggatgtgtttgacctgatcgta
gaagggatgaagtcttttccaggtagtgaagagctgcaattgcagggctgtcgggcattg
caattgcttctcgaaagagtttcagatgagcacctggtggactttgtggacagacaggat
cacagtgtggtggtgagagcagctcacgagttccgggacaatgaggacctgctcctgcac
gcccttagagtgctgctgcccctggctgacccccccagtaatgtggagatcctcatgtcc
aaaaaggagaggtgctactccctcatcagtcactccatgctctcgtttccccactcggaa
gccttgcaggaggttggctgctgcctgcttcaaaagttcacctcagagagttactacaac
atactggtactgaatggaatacatggagtcacagtgacagcgtgcctcacttacccagaa
aatgcaacactacaagcatctgccctaacctgcctggctgccctcacaaaaacgattgtg
ctgaacaaagggcttgagaatgcgacgggtgaggatgaggaggaggaggaggaggaggag
ggtgaggcggagaggcatcagatgaagggggaagagggtggagacctgtgctggatggag
gcgagctgcagagctctggagcttcacacagcagatgctgcagtacagcaggcggcatgc
ttggcactgaacagcctgctgatacatggcagtggactcatgtgggatcatgtttgtgag
gaggaggaggggaggaatccagtccagaggaagatcatggcagccatgctgctgcactcc
aactgtgtgggagtgttccaggcaactgctgttactctctgcaatctcattcagcgtaac
ggtaaaatccgaggacagctgctgtcccatggcatccatttcaacgttgtggagattatg
aagctgcacatacattctactagagtgtccagcagtggttgtagattgctcaagcagctc
tttcagggatggagggcaagtttagatgaggccaccatggctatgaatctgatcttaaaa
gctatggtgaagcataactttcaactacaagttcagttagatggtctacaagccagccta
acgttcctaagcccagacaggagtttgcaggagcatggcatgtctgtggcggatccggat
gcagaggacgtgtctctgagggttctgaagaatcagtgtgtgctagagggagctcacaca
gtctacctggaggctctcaacagattcatcagcaacaaagacattcaggagtacggcctt
tgtgtcctctctgagctggccggctgctcgggggccgttgacctcatgtgccaacaaggg
gccattgatacagtcctacatacactacagatgtttccaaggaaacgtgaaatccactat
tgggggttaagcctcctggtctacctcatcagcaaaaagaagctctctcgcacaatcgtt
cctgtcctggcctcggtgctcgtgcagtctatgcggcagtacatggaggatggagagatg
cgaatgaaaggtttcagggtagcatggaaactgatggacacctgctctgctgcagcggct
gcgctcgagagtgaaaactttgcaagggagatctttgatcagctgaggcaacactcctca
gaacaacgtagcgattctctgcacaggttgagctgcctgtgcttgtctaagatggtggct
gatggcgagattaagtacaccgtgctggagaaggcctgtgaagcggaggatctgctcatg
gctgaatgcctcatactgctgggagccgacatcaacaagaaaaccaaaacagagtccctc
atataccaggtgtgtgagcgtggcgggccactggctctggtggagctgctgctgagtgcg
ggcgttcacgagcagcacttgcggggagctctgggcgcgtgcgtgaggcgaggggatggc
cccgtggtcatcctgctgctgggccgcctgggcctggacctcaacaacagtgcgctctgc
ctggggggcttcaggctgggccgcctggaggctgcctggctcagccctctcctgtccgag
cgcagagttcctcccagtggccacaggaggaactgtaaaggccaaagtttagctcgacag
atccagttactccaaaagaagaaaggaactgtgggctcaccaggaatgctgaatgacctc
tctgggtacctttcaggggaagagagtgatgactccagtcacatctctcttgaagacagc
cttgtctttacctttgaggacatagagagtgatggaagtgaaggagcccacagtgttctg
aagctctgttgtgattcgccggaggagcagagggccaggtcaacaccaagacaaaacggc
cgacccagacacaacagctctgagggaggccaagtagagtcagactcgcaggagttttta
cacaagaagcttaatagacacgtgcagaatcacagagtacttaactctggtgagagcccc
tctccctccctgtcgggtggagaccgagagcacatccgcctgctggacctgtccgggaat
gagctggacagcctgagctgtctgatggacagcctcacagtccagaagcagctagagtat
ctgcaacgcctggacctgagtcagaacgccctgaccaagttccccagctccctgtgtgag
tgtctcaggagactgactcgtttggatctccaaggcaatcaactacagtcactgccagcc
caaatcctgggcttgccggctctgagcgtgctcaacgtgtcacggaactgtgtgggccca
gtgttaacctttgaccctgcggtctgctgtccgactttgcgacagcttaatctgtccttc
aaccacatcaccaccttcccgagccagctcggctacgtcatgacacgactggaggagttc
tttcttgaggggaaccagatcagtgctctatctggtgccctctgtctatctgaactgaaa
gttctcgatgtgagtaagaacagtatagaactcatctccagtgactgcctgtctgagtgc
cccagactggagactctgaatgcctccatgaacaaactcagttctttgtcacaccttccc
acaaaactaactactctaaagttttcaaacaatgacttcacagttgtacctgatgtcatt
gtgaatttgccaaatttacaatctgtggacatgaagaacaatcagatctccgtcttgcct
ggaccatctgcatgggcatctgtgaatctccgagagatcatgttcagtcacaatcagatc
gccacgctggacctgagtggaccagcctacaaatgggctcgggtagagaagctccatctg
tgtaacaacaagcttactgagattcctccacagattggcctgctggaggagctcacatct
ctagatgtaagccggaatagcggcctgcggtccttcccggatgagatgggaaaactgggg
cggctgtgggacctgcccctggatgggctgaaactccaactggacctgaaacacatcggg
aacaaaaccaaagacattgtcagatttctgcaacagcggctgaagaaggcggtgccctac
caccgcatgaagctagtggtggtgggcaatgggcagagtgggaagacctcgctcatgcag
cagctgatgaggctgaagagggtgcaggggcaccaggggccgagccccgccagcatccac
gtcagggactggagcatccgcgagcgcgacaaaaagaacatggtgctcaacgtgtgggac
ttctcaggtggagaggagtatagcgagtcgaatcctcattttatgggtcctcgtgcactc
taccttgtggtttacgatgtcagcaagggtgtgagtgaggtggatgccatcaaaccctgg
ctcttcaacatcaaagcggtggcccccctgtcccctgtgattctggtggggactcacaaa
gacaagtgtgacgagcgacagaaggaggagtgttttgagaaggtgcgggaggagttgatt
ggacagccagggttcccaatcatccgggattatcacgtggtttccatctttgatgacgca
gactctgtcaacagactccggaaagccattgtcagggaggtggttaactttaagatccag
ggccagcatgtgatgggccagctggtgccggactcttatgtggagctggagcggaggttg
ctgcgggagcgtgagcttgtggtcccggagttccccgtgctcacgcaccgccacctgctg
cagatgatccaggaaagccagctgcagctggaggaagcggagctaccacacgccatcagc
ttcctcagcgagaccgggatactcctgcattttgatgaccctgccctgcagcttggggag
ctctacttcatagaccctcaatggctttgcaatattatctcacagaccctgggcctgaag
atctgtagtggtggggagcatctgaggggagtggttcagcgcgctgttctggaggtgttt
ctcacggagagccgcagtttccccaagagcctcctgactcagtacctcaaactgcttgag
aaatttcagatcgctctccctcttggccaggaccagttcctggttcctaacagtctatat
gaggagaaacccatctttgatctgcctcactgtgagcactcggaggtcatcatccgactc
tacgagatgccctactttcccatgggctactggtccagacagatcaaccgtctcctggag
gtctctccattcatgctgtgtggaagagagagggttctgaaacccaaccgattgtactgg
aggaggggcatctacctgagttggtccccagaggcctactgcctagtagaggctgatgcc
gtggaaaatggcccagccaacgtcataaagatcactgttccctgctctcgcaaaggtcgt
gttttacttgggcaagtggtggaccacattgactccttgttggaggagtggttccctggt
cttctcaccacagacatccatgggaatggagagaccctgctgaagaagtgggttttgtac
agctttgatgatggacaagagtgcaacaggatgctgcttgaggaagtgctcaaccacata
gatgaagactgcctgttggtgaattcagaggactcccgctgcactgtgcccatcgctcag
atctcccctgacctcattctgagtgaccagcctgccagcacaatgctcaacagtgaggag
ctcgagatggacctttccaaagagtatcttctgggagatggaggttttggctcagtttat
agagccatttacaagaatgaagatgttgcagtcaagatcttcaacaagcatgcatcagac
ctctacatccaccgactggtcagacaggagttggccgtactgggccgcctgcaccacccc
agtctggtgagtctgctggccgccgggatcctcccccgccatgtgctggtcatggagttg
gccccgctcggctcactggactcactctttgagcatgaaaactgcagcctgaaccgcaag
ctccagcataggatcgccttacaggtggccgatggcctgagatatttgcactcctccatg
atcatttaccgagacctgaagccccataatgtgcttctgttcaacctgaagacagactct
gagatcattgccaagatcactgactatggcatttcccagtactgctgcagcatgggcgtc
agaagctctgagggaacaccaggtttccgtgcacctgaagttgcccgtggtggagtgatc
tataacctgcaggcagatgtgttttccttcggtctgctgctgtatgacctcctgacttgc
ggagagcgcatcgctgacggcatgaagttccccagcgagtttgatgagatagcggtacag
ggcaaactaccagacccggtgaagtactacggctgctccccgtggccaggcttccagatt
ctgatgaaggactgcctgaaggagagcccacaggacaggcccacctcagcacaggtgttt
gacaggctgaactcaggggagatgctgtgtctgatgacggaggtgaccgtgtacgggatg
ccctcagagtgcttcactctctccggagaccagggctcacaggtgtggctgggtggaggg
agctgcacccagagacttggctgcatctcctcagtggatctacagtctgagaaatcctct
tctcaggaggttgacagtagcccagtgctttgtgtggtgagtgtgcggatccctggagag
ccctgcgactggctcgtggcaggaacacaggctggctcacttattgtcatcgacactagt
aacccctccagttttcatcatctccagaaggcgtcagacgctgtgacgtcattgtttttt
cacacacacacaccacgcagtggtttgaagaattacctgttgattgggactgcagatgga
atgctggttatatatgaagattcagtgttgaagcacaagaatggggcacctgtgaagacg
gttcaggtggggaatgtcaacaccccgctggtcagtctttgtcagtccactcactcgcag
gacaggagcacagtctgggcaggctgtggcaccagggtgctctccctcactaccgactac
gacgtctggaaaaccatagacacaaaacacaggcaactgactcagaagcaacattgtgga
gtaagcagtgacacaaatgtatcgcgactggtggtggacaagcatgtgttcctgagcaaa
gttggaggccaggtggtggaggtctgggacaagaagagtgataagaccattgacctcatt
gactgcgctcagttacttcgaccgaacgcctgccgtaagcctagaagagccagctcggac
atgtttggggagatggagccatcttgggccactgtaaaagctttgttggtgcagcacagc
accacactatggatcggaaccagagctggacacatcctgctggtggaactgaccaacagg
caactactgcaggccatcagtctccactgccactctgtccggagcatggcatctgtgctg
atcgaaacgctcaacaggaaaagtgttgtgatggtactggggaaacggcaacgactagcc
caagatcaagtcaggaatcagtgtgatgaagactctgtactgatggtttggaacagcacc
ctcccccttgaagtgaaagacttaagtaggcattgtgagctaagggaggaaatcacagcc
aagatgagagaacagctcttcgactga
DBGET
integrated database retrieval system
