Alosa sapidissima (American shad): 121723984
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Entry
121723984 CDS
T11137
Symbol
arih1
Name
(RefSeq) E3 ubiquitin-protein ligase arih1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121723984 (arih1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121723984 (arih1)
Enzymes [BR:
asad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121723984 (arih1)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121723984 (arih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_14
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
121723984
NCBI-ProteinID:
XP_041966202
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All DBs
Position
11:complement(17438493..17461952)
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AA seq
527 aa
AA seq
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MDSDEGYNYEYDDDEECSEDSVEEEPEDDNLELGDVELVDPVVAGGERDECGETGGSGLG
PGQDEEDYRFEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFD
GNLDKLFSECHVINPSKKSRARLVNTRSSAQDMPCQICYLNYPNSYFTGLECGHKFCMQC
WGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNR
LLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDS
ETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNR
YNEDDAKAARDAQEVRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNM
SWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENATEVLSGYLE
RDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgagggttataactatgaatatgacgacgacgaggaatgtagcgaggat
agcgttgaagaggagcctgaagacgacaacctggaactgggggatgtggagctggtcgat
ccagtggtggccggtggtgagcgagatgaatgtggagaaactgggggaagcggcctcggg
cctggtcaagatgaggaggactaccgattcgaagtactcactgccgaacagattcttcaa
catatggtggagtgtatcagggaggtcaacgaggtcatacagaatccagcaacaataact
aggatacttcttagtcactttaactgggacaaagagaagctgatggaaaggtactttgat
gggaacctggacaagctgttctccgagtgccatgtgatcaaccccagtaagaagtcccgg
gcacgtctggtcaacacgcgctcttccgcacaggacatgccatgccagatctgctatctc
aactaccccaactcgtacttcacaggcctggagtgcggtcacaaattctgtatgcagtgt
tggggcgactacttaaccaccaaaatcatagaggagggaatgggacagactatttcctgt
ccagcacatagctgcgatatcctcgtggatgacaacaccgtcatgaggttgatcacagac
tcgaaagtgaaattgaagtaccagcatttaattactaatagctttgtagagtgcaatcga
ctgttaaaatggtgccctgcgccagactgccaccacgtggtcaaagtccagtaccccgac
gccaagcctgtcaggtgcaagtgtggccggcagttctgcttcaactgtggagagaactgg
catgaccccgtcaaatgtaagtggctgaggaaatggatcaaaaagtgtgacgacgacagt
gaaacatcaaactggattgctgcaaataccaaggaatgtcccaagtgtcacgtcaccata
gagaaggacggcggctgcaaccacatggtttgccggaaccagaactgcaaagctgagttt
tgctgggtctgcctcgggccctgggaaccccatggctctgcctggtacaactgcaaccgc
tacaacgaggacgatgccaaggccgcgcgagatgctcaggaggtacgttctcgggcggcg
ctgcagcggtatctgttctactgcaaccgctacatgaaccacatgcagagcctgcgcttc
gagcacaagctgtacgcacaggtcaagcagaagatggaggagatgcagcagcacaacatg
tcctggatcgaggtgcagttcctcaagaaggccgtggacgtgctgtgccagtgccgctcc
acgctcatgttcacctacgtcttcgccttctacctcaagaagaacaaccagtccatcatc
ttcgagaataaccaggcagacctggagaatgccacagaagtactgtctggatacctggag
cgagacatttcccaggattccctgcaggacatcaagcagaaagtacaggacaagtacaga
tattgtgagagcagacggagagtcctgctgcagcacgtgcacgaaggctatgagaaggac
ctgtgggagtacatagaggattga
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