KEGG   Alosa sapidissima (American shad): 121724548
Entry
121724548         CDS       T11137                                 
Symbol
pdlim3a
Name
(RefSeq) PDZ and LIM domain protein 3a
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:asad00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121724548 (pdlim3a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:asad04990]
    121724548 (pdlim3a)
Domain-containing proteins not elsewhere classified [BR:asad04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   121724548 (pdlim3a)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 121724548
NCBI-ProteinID: XP_041967129
LinkDB
Position
1:19397651..19408176
AA seq 392 aa
MARRGGVVSHPSSTRSCLKGLSQSTVVVCTTAPCGDFHSKPHTHTGESDRDRHTLTHTHT
HTHRDTYTQAGALGHDTDMPVNVVLDGPAPWGFRLVGGKDFNQPLSISRINPGSKAARAN
LCPGDVIIAIGGMPAENLMHCEAQNRIKDCGHQLCLTIERSESRLWSPNVSEGGKVNPFK
INLEAEPQEYRPIGTGHNRQAQPFVAAANIDDKRQLVSASYNTPIGLYSSGNIQDAMHGQ
MRGLVQDKPVSPRTLTSIEESDVYRMLQKDQEDELHEPRQSGSFKALQDYVNSDGTRPLV
TRTVRAPTSKPAAPTGNLQKLPVCDKCGNGIVGTVVKARDKFRHPGCFVCSDCDMNLKQK
GYFFVEGQLYCEIHARARTRPPEGHDLITAYT
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggccaggcgtgggggagtggtctcccatccctcttccacacgctcttgcttaaagggc
ctgagccagagtactgtagtagtctgtacaacagcaccctgtggcgattttcactcaaaa
ccacacacacacactggtgagtctgacagggacagacacacactcacacacacacacaca
cacacacacagagacacatacacacaagcaggggcactaggacacgacacggatatgcca
gtgaatgttgtcctggatggacctgccccatggggcttcagactagtcggggggaaggac
ttcaaccagcccctgagcatctccaggattaaccctggcagtaaggcggccagggccaat
ctgtgtcctggtgacgtcatcatagcgattggaggcatgcctgctgagaacctgatgcac
tgtgaggcccagaacagaatcaaggactgtggccatcagctgtgtctcactatagagagg
tctgagagcagactgtggtctccaaacgtatcggagggtgggaaagtcaacccttttaaa
atcaacttagaagcagagccacaggagtatcgaccaataggaacaggccataaccgtcag
gcccagccttttgtggctgcagcgaacattgatgacaagcgtcagctggtgagcgcctcc
tataacacccccatcggactctactcttcaggaaacatccaggatgccatgcacggacag
atgaggggcctcgtccaggacaaacctgtgagccccagaaccctgacctccatagaagag
tcggatgtgtaccgcatgctacagaaggaccaggaggacgagctgcatgagccccgccag
tctggctccttcaaggccctgcaggactacgtcaacagcgatggtactcgaccactggtg
acaaggaccgtgagggctcccacctctaaacctgccgctccgactgggaacctgcagaaa
ctgcctgtgtgcgacaagtgtggcaacgggatagtggggacggtggtgaaggcaagagac
aagttccgtcatcctggctgttttgtgtgctccgactgtgacatgaacctgaagcagaaa
ggctatttcttcgtggagggtcagctttactgcgagatccacgcccgtgcccgaacaaga
cctccagagggtcacgatctcatcacagcttacacttaa

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