Alosa sapidissima (American shad): 121724548
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Entry
121724548 CDS
T11137
Symbol
pdlim3a
Name
(RefSeq) PDZ and LIM domain protein 3a
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121724548 (pdlim3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121724548 (pdlim3a)
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121724548 (pdlim3a)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121724548
NCBI-ProteinID:
XP_041967129
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All DBs
Position
1:19397651..19408176
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AA seq
392 aa
AA seq
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MARRGGVVSHPSSTRSCLKGLSQSTVVVCTTAPCGDFHSKPHTHTGESDRDRHTLTHTHT
HTHRDTYTQAGALGHDTDMPVNVVLDGPAPWGFRLVGGKDFNQPLSISRINPGSKAARAN
LCPGDVIIAIGGMPAENLMHCEAQNRIKDCGHQLCLTIERSESRLWSPNVSEGGKVNPFK
INLEAEPQEYRPIGTGHNRQAQPFVAAANIDDKRQLVSASYNTPIGLYSSGNIQDAMHGQ
MRGLVQDKPVSPRTLTSIEESDVYRMLQKDQEDELHEPRQSGSFKALQDYVNSDGTRPLV
TRTVRAPTSKPAAPTGNLQKLPVCDKCGNGIVGTVVKARDKFRHPGCFVCSDCDMNLKQK
GYFFVEGQLYCEIHARARTRPPEGHDLITAYT
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcgtgggggagtggtctcccatccctcttccacacgctcttgcttaaagggc
ctgagccagagtactgtagtagtctgtacaacagcaccctgtggcgattttcactcaaaa
ccacacacacacactggtgagtctgacagggacagacacacactcacacacacacacaca
cacacacacagagacacatacacacaagcaggggcactaggacacgacacggatatgcca
gtgaatgttgtcctggatggacctgccccatggggcttcagactagtcggggggaaggac
ttcaaccagcccctgagcatctccaggattaaccctggcagtaaggcggccagggccaat
ctgtgtcctggtgacgtcatcatagcgattggaggcatgcctgctgagaacctgatgcac
tgtgaggcccagaacagaatcaaggactgtggccatcagctgtgtctcactatagagagg
tctgagagcagactgtggtctccaaacgtatcggagggtgggaaagtcaacccttttaaa
atcaacttagaagcagagccacaggagtatcgaccaataggaacaggccataaccgtcag
gcccagccttttgtggctgcagcgaacattgatgacaagcgtcagctggtgagcgcctcc
tataacacccccatcggactctactcttcaggaaacatccaggatgccatgcacggacag
atgaggggcctcgtccaggacaaacctgtgagccccagaaccctgacctccatagaagag
tcggatgtgtaccgcatgctacagaaggaccaggaggacgagctgcatgagccccgccag
tctggctccttcaaggccctgcaggactacgtcaacagcgatggtactcgaccactggtg
acaaggaccgtgagggctcccacctctaaacctgccgctccgactgggaacctgcagaaa
ctgcctgtgtgcgacaagtgtggcaacgggatagtggggacggtggtgaaggcaagagac
aagttccgtcatcctggctgttttgtgtgctccgactgtgacatgaacctgaagcagaaa
ggctatttcttcgtggagggtcagctttactgcgagatccacgcccgtgcccgaacaaga
cctccagagggtcacgatctcatcacagcttacacttaa
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