Alosa sapidissima (American shad): 121724745
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Entry
121724745 CDS
T11137
Name
(RefSeq) eukaryotic initiation factor 4A-II-like isoform X1
KO
K03257
translation initiation factor 4A
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121724745
03012 Translation factors [BR:
asad03012
]
121724745
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asad04147
]
121724745
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121724745
mRNA cycle factors
Stress granule specific factors
121724745
Translation factors [BR:
asad03012
]
Eukaryotic type
Initiation factors
eIF-4
121724745
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121724745
Exosomal proteins of bladder cancer cells
121724745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Flavi_DEAD
UvrD-helicase
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-GeneID:
121724745
NCBI-ProteinID:
XP_041967428
LinkDB
All DBs
Position
12:complement(6169734..6176831)
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AA seq
410 aa
AA seq
DB search
MSDSADYNSSRDKDHGGPEGMEPDGVIESNWNEITDNFDDMILKETLLRGIYAYGFEKPS
AIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEQKETQALVLAPTRELAQQI
QKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAYHIVVGTPGRVFDMLNRRYLSPKWI
KMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPSDVLEVTKKFMRDPIRILV
KKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARD
FTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENY
IHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactctgcggattacaacagttccagagataaagaccatggaggccccgaagga
atggagcctgatggtgtcatcgagagcaactggaatgagatcacagacaactttgatgac
atgatcctgaaggagacactcctgaggggaatctatgcctatggttttgagaagccatca
gccattcagcagcgggcaatcattccatgcatcaagggttatgatgttattgctcaggcc
cagtcaggcacagggaagacggccacttttgccatttccatcctacagcagctggagatt
gagcagaaagagactcaggctctggtactggctccaaccagggagttggcccagcagatc
cagaaagtcattttggctctgggtgactacatgggggccacttgtcatgcctgcattggt
ggtacaaacgtgcgcaatgagatgcagaaactccaagcggaggcgtatcacatagtggtg
gggaccccaggccgtgtctttgacatgctgaaccgacgatacctttctcctaagtggatc
aagatgtttgtcttggatgaagctgatgaaatgctgagtcgaggattcaaggatcagatc
tatgaaatctttcaaaagttgagcacaaacatccaagttgtgctgctctcagccaccatg
ccatctgacgtgctggaggtgaccaagaagttcatgcgcgatccaatccgcatcctggtg
aagaaggaggaacttaccctcgagggtataaagcagttctacatcaatgtggagcgcgag
gagtggaaattggacaccctctgtgatctgtacgagactctgacaatcacccaggctgtg
atcttcttgaacacaaggagaaaggtggactggctgactgagaagatgcatgccagggac
ttcaccgtctctgcgttgcacggagacatggatcagaaggagcgtgatgtgatcatgcgg
gaattccgctcaggatccagcagggtcctgatcactaccgatttgctggctcgtggaatt
gacgtacagcaagtctctctagtcatcaattatgaccttcccacaaaccgagaaaactac
atccatagaattggacgtggtggccgtttcggcagaaaaggagttgccattaactttgtt
acagaggaggacaagaggattcttcgggacattgagacattttacaatactactgttgag
gagatgcctatgaatgtggctgatctgatttaa
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