Alosa sapidissima (American shad): 121724761
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Entry
121724761 CDS
T11137
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121724761 (sin3b)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121724761 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
HHD_RTEL1
PAH_ZNF598
At4g15545_C
mTOR_dom
MCP_V20_C
Motif
Other DBs
NCBI-GeneID:
121724761
NCBI-ProteinID:
XP_041967462
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Position
12:complement(35438239..35459971)
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AA seq
1238 aa
AA seq
DB search
MAKIQAHSNAKQINQIQDKAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFGNDPGIYNK
FLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGLVFLQSPF
SAQNAAGQSKAVVGTTAPVRSSASTATEGGPVPSESMASPESISSSSASGAGPESSSRLS
LPLPSRESHAQPSAGSSPASEPSPVEFDSAISYVNKIKNRFLDHPETYRSFLEILHTYQK
EQLEIKESRARGSAGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFTSSSLTGKD
HLKKAEEEDLSKQSKKRPRPMLLPHMTPLLKKKMKYSCAKDQSFASVGKHGVLREFSFFD
KVRRLFKSQEVYENFLRCIALFNQEVVSAAELLQLVSPFLGKFPELYTQFKSFLGEKELS
HATSGLADRYMEGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSF
PSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLARMSPEDQ
ERFRLDDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKEDEWRE
AQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIETIYDERQEQSTEEG
GVGQQRDGGGGGSSSSEPHMVFGYEDKQILEDAAALIIYHVKRQPTIHKDDKDHIKRIMQ
HFLPDLFFARRGELSETEDWTDEENEAEEASGERAGGTVGGGGGGSDSGAAHPPGAGVQQ
QLNGDSRRRRCTSPPSSTSTETSTSATTPHAASTSHHAGPGEASGGTGEKLDLRDPEAEH
QKEMDGVYNLFFVNNNWYFFLRLHQTLCSRLLRVYRQAERQLLEHRADQSHQRMLMAEGW
RDKPSDLAMELRLKQPSEVELEEYYPAFLDMVRSLLDGNLESTQYEDTLREMFTIHAYIG
FTVDKLIQNIVRQLQHLVSDEVCLQVAELYLAERKRGAAGGNLSSQCVRAAWETSYQWKA
ERVMAEENCFKVMFIQNKGEVTLAIELLDTEEAQADDPLDVQSLSSYMEQLVGSESSALC
AQGEGCYFKPVFLPRNLRHFRHWQVRQVEAMRCRREWHRQLAVESAGSLDCRFKLNTHKM
VFVMNSEDYMYRRGALVKARKSQHQVACGQHERFRRWHQGWLGEHVSAAGERAVTHWLMG
EEEEDMLPCKTTCVATHLKGLPVNRYQVLYSSKPPASP
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaattcaggcacacagcaacgcgaagcaaataaaccaaattcaggacaaagcc
tatgttgtacaaaagcaagtacaacaacagcactttcaaaaactgaaggtcgaagatgcc
ttgtcatatcttgatcaagtcaaaatacggttcggaaatgacccggggatttataacaaa
ttcctggatatcatgaaagaattcaagtctcaaagcattgataccccgggagtaataaac
cgagtgtctcagcttttccacggacaccccgatctggtgttgggatttaatgccttcttg
ccccctggctaccgaatagagattcccaagaatggcctggtgttcctgcagtcccctttt
tctgcacaaaatgcagcggggcagagtaaggctgtggtgggcacaacggcgcctgtccgt
tcatctgcgtccacggcgacggaaggcggccccgtgccgagcgagtccatggcgtcgccc
gagagcatatcctcctcctctgcctcaggggcggggccagagtcctcctccagactctcc
cttcccctccccagccgagagagccacgcccagccctcggctggctcctcccccgcctcc
gagcccagccccgtggagtttgacagtgccatcagctacgtcaacaagatcaagaaccgc
ttcctggaccaccccgagacctacaggtcctttctggagatactgcacacttaccagaag
gagcagctggagatcaaggagagcagggcccgcggcagcgctgggatgaccgaggacgag
gtcttctccaaggtggccagcctcttcaaaggacaggaggacctcctggcagagttcgga
cagttcttgccagacgccaagagatccctgtttaccagcagctcccttacgggaaaagac
caccttaaaaaggcggaggaagaggacctgagcaagcagagcaagaagagacccaggccc
atgctgctcccgcacatgacacccctgctgaagaaaaagatgaaatattcctgtgcaaaa
gaccaatcgtttgcttcagtcgggaagcatggggttctgcgagagttctcgttctttgat
aaggtgcggcgtctctttaagagtcaggaggtctatgagaacttcctgcgctgcatcgca
ctcttcaaccaggaggtggtctctgccgccgagcttctccagctggtcagccccttcttg
gggaagttcccagagctctacacccagttcaagtccttcctgggtgagaaggagctgtcc
cacgccacgtcgggtctcgctgaccgctacatggagggcgggggccgagaggtggactac
gcgtcctgcaagcgcctggggtccagctacagggccctgcccaagacctaccagcagccc
aagtgcagcggacgcaccgccatctgcaaagaggtgctgaatgacacctgggtgtccttc
ccctcctggtcggaggactccacgtttgtcagctccaagaagaccccctacgaggagcag
cttcatcgctgtgaggacgagcggtttgagctggacgtggtgctggagactaacctggcc
accatccgcgtcctggagagtgtgcagaagaagctggcgcgcatgtcgcccgaggaccag
gagcgcttccggctggacgactgcctgggcggcacctccgaggtcatccagcgccgcgcc
gtctaccgtatctacggcgacaaggcgcccgagatcatcgaggggttgaagaggagtcca
gccaccgctgtgcctgtggtgctgaagagactgaaagcgaaggaggatgagtggcgcgag
gcccagcagggctttaacaagatctggcgcgagcagtacgagaaggcctacctcaaatcg
ctggaccaccagggggtcaacttcaagcagaatgacatgaaggccctgcgctccaaaagc
ctgctcaatgagatcgagaccatctatgatgagcgtcaggagcagagtacagaggagggg
ggtgtcggtcagcagagggacggaggcggtggcggctcttcgtccagcgagccccacatg
gtgttcggctacgaggacaagcagatcctggaggacgcggccgcgctcatcatctaccac
gtgaagcgccagcccaccatccacaaggacgacaaggaccacatcaagcgcatcatgcag
cacttcctgcccgacctgttcttcgcccgccgcggagagctcagcgagaccgaggactgg
acggacgaggagaacgaggccgaggaagcgagcggcgagcgagccggcggcaccgtggga
ggaggaggaggagggagcgactctggagcagcgcatcctcccggcgcgggggtgcagcag
cagctgaacggagactcgcggagacgccgctgcacttcaccgccgagctccaccagcacg
gagacgtccaccagcgccaccacgccgcacgccgcgtccacctcgcaccacgcggggccc
ggcgaggccagcggcggaaccggagagaagctggacctgcgggaccccgaggccgagcac
cagaaggagatggacggcgtgtacaacctgttcttcgtcaacaacaactggtacttcttc
ctgcggctgcaccagacgctgtgctcgcggctgctccgcgtctaccggcaggccgagcgg
caactgctagagcaccgcgccgaccagagccaccagaggatgctcatggccgaggggtgg
agggacaagcccagcgacctcgccatggagctgcgcctcaagcagcccagtgaggtggag
ctggaggagtactacccggcgttcctggacatggtgcgcagcctgctggacggcaacctg
gagtcgacgcagtacgaggacacgctgcgggagatgttcaccatccacgcctacatcggc
ttcaccgtcgacaagctcatccagaacatcgtcagacagctccagcacctggtgagcgac
gaggtgtgtctgcaggtggcggagctgtacctggcggagcgtaaacgcggtgctgccggg
ggcaacctctcgtcacagtgcgtacgcgctgcctgggagaccagctaccagtggaaggcc
gagagagtcatggccgaggagaactgcttcaaggtgatgttcatccagaataagggagaa
gtgaccctggccatcgagctgctggacacagaggaggcgcaggcggacgaccccctggat
gtgcagagcctgtccagctacatggagcagcttgtgggcagcgagtcgtcggccctctgc
gctcagggcgagggctgctacttcaaaccagtcttcctgcccaggaacctgcgccacttc
cgccactggcaggtgcgccaggtggaggccatgcgctgtcggagagagtggcatcgccag
ctggccgtggaaagtgccggaagcctggactgccgcttcaaactcaacacacacaagatg
gtgttcgtcatgaactcggaagactacatgtaccggagaggagcactggtgaaggccagg
aagtctcagcaccaggtggcgtgcgggcagcacgagcggttccggaggtggcatcagggc
tggctgggcgaacacgtgagtgcagcgggggagcgggcggtgacccactggctcatggga
gaggaggaggaggacatgctgccctgcaagaccacttgcgtggccacgcacctcaagggc
ctgcccgtcaacaggtaccaggtgctctacagcagcaagccgccagcctcgccctag
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