KEGG   Alosa sapidissima (American shad): 121724832
Entry
121724832         CDS       T11137                                 
Name
(RefSeq) calreticulin-like isoform X1
  KO
K08057  calreticulin
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04141  Protein processing in endoplasmic reticulum
asad04145  Phagosome
asad04148  Efferocytosis
asad05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:asad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121724832
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121724832
   04148 Efferocytosis
    121724832
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    121724832
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:asad03110]
    121724832
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:asad04091]
    121724832
Chaperones and folding catalysts [BR:asad03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   121724832
Lectins [BR:asad04091]
 L-type lectins
  121724832
SSDB
Motif
Pfam: Calreticulin
Other DBs
NCBI-GeneID: 121724832
NCBI-ProteinID: XP_041967614
LinkDB
Position
12:complement(25030775..25039883)
AA seq 443 aa
MRPTLAICALLGLLAITDATVFFKEQFLDGDGWKSRWVESKHKSDYGQWKLTAGKFHGDP
EKDKGLQTSQDAHFYAISSRFKPFSNEGKTLIVQFTVKHEQQIDCGGGYVKLFPADLNQA
DMHGDSKYYIMFGPDICGYGTKKVHVIINYKGQNHLIKKEVKARDDEHTHLYTLIVRPDQ
TYEVKVNNEKLEWGSLEDDWDLLPSKKIKDPDAKKPEDWDDRVTIDDPEDTKPEDWDKPE
NIPDPDAKKPDDWDEEMDGEWEPPMIPNPEYKGEWKPKQIDNPNYKGSWVHPDIDNPDYT
PDSTIYKFDNIGVIGLELWQVKSGTIFDNFIITDDVKTADDFAKETWGVTKGPEKTMREQ
QLEEERKQREENSKKDDMKDEDKDVGGDYNGGDEDEDILDEEGEEEEEEEENEIDEEIGD
ETSPVEEEEEDEEAPMKDVKDEL
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgcgacctactttggcaatatgtgcattacttggattattagccatcacagatgctact
gtattcttcaaagagcaatttctggatggagatggatggaagagtcgttgggtggaatct
aaacacaaatctgactatggccagtggaagctgactgcagggaaatttcatggagatcct
gaaaaggacaaaggccttcaaaccagtcaggatgctcatttttatgccatctcaagccgt
ttcaaaccttttagcaatgagggtaaaactctcattgtgcagtttacggttaaacatgaa
caacaaatagattgtggtggtggatacgtgaagctcttccctgctgacttgaaccaagct
gatatgcacggagactccaaatactacattatgtttggccctgacatttgtggctatggc
accaaaaaggttcatgtcattatcaactacaagggacagaaccacctcataaagaaagaa
gtcaaagccagggatgatgaacacacccacctttatactctgatcgtgagacctgaccag
acctatgaggtgaaagttaacaatgagaagctggagtggggcagccttgaggacgactgg
gatcttttgccttctaaaaagatcaaggacccagatgccaagaagcctgaggattgggat
gatcgtgtcacaatcgatgaccctgaggatacaaaaccagaggactgggacaagcctgaa
aatatccctgatcctgatgccaagaagccagatgactgggatgaggaaatggatggggag
tgggagccacccatgattcctaacccagagtacaagggagaatggaaaccaaagcagatt
gataatcccaactacaaaggcagctgggtgcatcctgatattgacaaccctgactacaca
cctgatagcacaatttacaagtttgacaatataggagtaattggccttgagttgtggcag
gttaaatctgggaccatttttgataatttcatcattactgatgatgtaaagacagcagat
gattttgctaaggagacctggggagtcacaaagggacctgagaagacgatgagagagcag
cagctagaggaggagaggaagcagagagaggaaaatagcaagaaggatgatatgaaggat
gaggataaggacgttggtggagattacaatggcggcgatgaagacgaggacatccttgat
gaggagggtgaagaggaggaggaagaagaagagaatgagattgacgaggagatcggagat
gagaccagtccagtcgaggaggaagaggaagacgaggaggctcccatgaaagatgtgaaa
gatgaactctga

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