Alosa sapidissima (American shad): 121724869
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Entry
121724869 CDS
T11137
Name
(RefSeq) 5-hydroxytryptamine receptor 3E
KO
K04819
5-hydroxytryptamine receptor 3
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121724869
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121724869
Ion channels [BR:
asad04040
]
Ligand-gated channels
Serotonin (5-HT3)
121724869
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121724869
NCBI-ProteinID:
XP_041967689
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Position
12:38083807..38104690
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AA seq
471 aa
AA seq
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MGPSRGHLFTSCIFLLTVCVCLCELSCREGHSGPTYESLQDVFDRKPFRPAVNLSNPTIA
NISFTLYAVLGVNEKTQILTTFLWLRLYWFHEFLIWDPHKCDGVTKISLPVKDLWMPDII
VYEFVDDDVSQACPFVYVNHTGHIRYDRMLRLVSACNLEIFSFPFDIQNCTFTFGSYMHT
IKDVRVSPALSFAEMSGNSKQYLEASGEWELVVILGESSILQFGIDEWDIITFWVVIKRR
PILYVVNLLIPSSFLMVIDILSFYLPPHSVDRASFKMTLILGYTVFLLIMNDLLPSTANG
TPIIGIYFSVCLALMVISLLETVIITNVLHHNSMKYRGVPRWVQVLVLGYIAKLICYRWP
EKTRPDIRQKPDNSSSLAIQPPTQTPAANRNRDSEMLSGALPLAVPELTQICRDVNVICS
HLSELQQENVLLEQWCHVGYILDFLLFRIYLLLITCYAIVIICMWCIWIYQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggaccttcccgtggacacctgttcacatcctgtatctttctgctgacagtgtgtgtg
tgcctctgtgaactgagttgtcgtgagggtcacagcggacctacttacgagtcgctccag
gacgtgtttgacagaaaacccttcagaccagcggttaatctcagcaacccgaccatcgcc
aacatctccttcactctctatgcagtgctgggtgtgaatgagaaaacacagatcctcact
acgttcctctggcttagactttactggttccatgagttcctcatatgggatcctcacaaa
tgtgacggtgtcactaaaatctccctcccggtgaaggatctctggatgcctgacatcatc
gtatatgaattcgtggatgacgacgtgtcccaagcctgcccgtttgtgtatgtcaaccac
acggggcacatacgctacgaccgcatgctgaggcttgtgagcgcctgcaacctggagata
ttcagcttcccttttgacatccagaactgcaccttcacctttgggtcctacatgcacaca
ataaaggacgtgagggtgagcccggccctgtcctttgcggagatgtcggggaactcaaag
cagtacctagaggccagtggtgagtgggagctggtggtcatcctgggggagtccagcatc
ctgcagtttgggatcgacgagtgggacatcatcacattctgggtggtgataaagagacgg
cctatcctgtatgtggtcaacctcctgattcccagctccttcctcatggtcatcgacatc
ctgtccttctacctgccgccccacagtgtggaccgtgcctccttcaagatgaccctcatc
ctgggctacacagtcttcctgctcatcatgaacgacctgctgcccagcacagcaaacgga
acacccatcataggaatctacttctctgtgtgtctggccctgatggtcattagtctcctg
gagacggtcatcatcactaacgtgctccaccacaactccatgaagtaccgcggcgtacca
cgctgggtccaggtgctcgtgctgggctacatcgccaagctcatctgctatcgctggccc
gagaaaacccgccccgacatccgccagaagccagacaactcgagctccctggccatacag
cctccgacccaaaccccagcggccaaccggaacagagacagtgagatgttgtcgggagcg
ctacccctggccgtgccggagttgactcagatctgccgggatgtaaacgtgatctgctcg
cacctgtcggagctgcagcaggagaacgtactgctggagcagtggtgccacgtgggctac
atcctggacttcctgctcttccgcatttacctgctcctcatcacctgctacgccatcgtc
atcatctgcatgtggtgcatctggatctaccagtga
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