Alosa sapidissima (American shad): 121724903
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Entry
121724903 CDS
T11137
Symbol
sec16b
Name
(RefSeq) protein transport protein Sec16B isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121724903 (sec16b)
Membrane trafficking [BR:
asad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121724903 (sec16b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
YscW
Motif
Other DBs
NCBI-GeneID:
121724903
NCBI-ProteinID:
XP_041967756
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All DBs
Position
12:6841373..6875507
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AA seq
986 aa
AA seq
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MCMPPVTASVTIATRLGAADLTMASRGDSWQHQDRETHQQHHRPRDDYPRPSHPTGPGPY
PHMDPRERERPWSAVDPRYAHYPARPDVTHGSAPYYRPGYGHPHSRPFSRQGYDYSYWEY
RDPYAYYDHHHRGQHYQHPDAGGWSSHDQWRTNPPPDKSHGQDWGGLPYQECHSYDQRGE
SSQYDYSQSEGHYRRKSEECEPGVLASSKASGLSSSSTELSQYINGAEESDPIPQSYLEP
EIVPQLTAPLKYTLPHALVSFGPAGQLIRVSSAIASDGERALVEFHSLEVILGESQEQKD
MRAFPGPLARPDLHKVEVITFALQRAEACLKDDTLQDAPSAALLWNLLVLLCRQNGRIVG
SDIAELLTRGTISLGACEGSDGQGNEASLIDLTDRPPPEEEPLDTADLLTGNPTACPADS
TEEALRSYTQLLLSGRKKEALESAMKSGLWGHALFLASKMDNRAYTTVLNRFTGCLSPSD
PLQTLFQLLSKRIPTVATCCGSDRWGDWKPHLSVMLSNESEDCDTHRRAIITMGDTLASR
GQLHAAHICYLTARTPFGVYTNKAERLVLLGSSHSLPFLKFIQSSAMQCTEVFEYSQRLG
NPAHVDPPFQVYKFLYACRLMDCGLASQAYHYCEVVGKTLLTLQEPPTVLLKELIKLTDR
LKHAEASLADTGANGDLEDPDWLIQLRAREIGAQMKHWVCNDPYQPAGVENAVDPEENRV
GSGVHSDNQHYGEGAWALTAAATATDLPDSLPDGAQGGWIPQVDGPPPSTGQLMQESPLL
TGYGQMMVPSLTEPRKQAESVAKPVPHCAAHHQGPSLLPILPSSYYPPPGEALHPSPCSP
PAEPQGLGFSSGPAMVPLYTNDATPGGGDLAEPTQFPILPEPKTKDTASIQPGKSTKAGW
FSGWFQSKAKDTKSKESDVAPPSAPQEPTSSPIFSSGPLQTSVESSRTLNAPPLSTGVNP
FSRQAAVGQAPGVFMTPKHGSMPQSA
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatgccaccagtgaccgcctcagtgactattgccaccagacttggtgctgctgat
ctgaccatggcttctagaggtgacagctggcagcaccaggacagagagacgcaccagcag
catcatcgccccagagacgactaccccagaccctctcaccccacagggccaggaccttac
cctcatatggaccccagagagagagagcgaccgtggtctgctgtggaccccagatacgct
cactatccagccaggccagatgtgacccatggcagtgccccatattacaggccaggatac
ggtcatccacactctcgacccttttccaggcagggatatgactactcatactgggaatac
agagacccctatgcgtactatgaccaccatcacagaggccaacattatcaacatccagat
gccggtggatggtcatctcatgaccagtggaggacaaaccctcctcctgacaaaagccat
ggccaggactggggtggactgccataccaagaatgccacagctatgaccaaagaggggag
agttcacagtacgactacagccaatcagagggtcactacaggaggaagagtgaggagtgt
gagccaggtgtgctggccagctccaaggcctcaggtctgtcctccagcagtactgagctc
agccagtatatcaatggggcagaggagagcgatcccatcccacagtcctatttagagcca
gagattgtgccccagctgactgctccgctgaagtatactctccctcatgcactggtcagc
tttggtccggctggacagctgatccgggtcagctctgctatcgcctcagatggcgaacgg
gccctggtggaatttcatagcctggaggtcatccttggagagtctcaggaacaaaaggac
atgcgagccttccctggacctctggccaggccagacctgcacaaggtggaggtcatcacc
tttgctctgcagagggcagaggcctgtctgaaggatgacacactgcaagatgctccctct
gctgccctcttgtggaacctgctggtactgctctgcagacagaatgggagaatcgtgggg
tctgacatcgcagagctcttgacgcgaggcaccatctccctgggtgcctgtgaggggtct
gatgggcagggcaacgaggccagcctcatcgacctaaccgacaggcccccaccagaggaa
gagcccctggacacagcggacctgctgacggggaaccccacggcttgccctgctgactcc
acagaggaggctctgaggagctacacacagctgctgctctccgggaggaagaaggaggct
ctagagtcggccatgaagagtggcctgtgggggcatgccttgttcctggccagtaagatg
gacaacagagcatacaccaccgtcctgaacagatttacaggctgtctatcgcccagtgac
cctctacaaaccctcttccagctgctgtccaagagaatcccgaccgttgccacgtgctgc
gggagtgacaggtggggcgactggaagccccatttgtccgtcatgctgtccaacgaaagt
gaggattgcgatactcaccgcagggctatcattaccatgggagacacgctagcctctagg
gggcagctgcatgctgctcatatctgctacctcacagcacgtactccctttggtgtgtac
acaaacaaagctgaacgcctggtgcttcttggcagtagtcacagtcttccctttctgaag
ttcattcagagctcagcgatgcagtgcacagaggtgtttgagtacagccagaggctcgga
aaccctgctcatgttgacccaccttttcaggtgtataagttcctgtatgcttgtcgtctg
atggactgcggccttgcctctcaagcctaccactactgtgaggtggttgggaaaactctg
ctcacactgcaggaaccccccacggtgctactgaaagaactgataaagctgaccgacagg
ctaaagcacgctgaggcctctctggctgacacaggagcaaacggggacttggaggatcct
gattggctgatccagctgcgtgccagagagatcggagctcagatgaagcactgggtttgt
aatgatccataccagccagctggagtggagaatgctgtggatcctgaagagaacagagtt
ggctcaggtgtgcactctgacaatcagcattatggcgaaggggcgtgggcactcactgct
gctgccactgccactgacctgccagactccctccccgatggggcccaggggggctggatc
ccacaagtggacggccctcctccaagcacaggtcagctgatgcaggagtccccactgctc
acaggctacgggcagatgatggtaccctcactcacggaacccagaaaacaggcggagtct
gtggccaagcctgtcccacactgtgctgctcatcaccagggtccaagtctcctccccatc
ctgcccagctcctattatccccctccaggagaggctctgcatccatccccctgctctcct
ccagcagagccccaaggtctaggcttctcttccggaccagcaatggtgcctctctacacg
aatgatgcgaccccggggggcggtgatttggccgagccgacccagtttccaatcctgcca
gagcccaaaaccaaggacacagctagcatccaaccaggcaaaagcactaaggcgggctgg
ttcagtggatggttccagagcaaggcgaaggacacgaagagcaaagagagtgatgtcgcc
cccccttctgccccacaggagccaacgagcagtcccattttctcgtcggggccacttcaa
acatcagtggaatcctctagaacattaaacgctccccctttgtccacaggtgtcaaccct
ttctccagacaagctgctgtaggtcaggctccgggtgtattcatgacaccgaagcacggg
tctatgccacagagtgcttag
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