Alosa sapidissima (American shad): 121724904
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Entry
121724904 CDS
T11137
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 isoform X1
KO
K03032
26S proteasome regulatory subunit N2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121724904 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
asad03051
]
121724904 (psmd1)
Proteasome [BR:
asad03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
121724904 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Cnd1
Zip
TAF4
Tim54
Motif
Other DBs
NCBI-GeneID:
121724904
NCBI-ProteinID:
XP_041967759
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All DBs
Position
12:6575427..6616628
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AA seq
962 aa
AA seq
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MITSAAGIISLLDEDEPKLKEFALHKLNAIVNDFWAEISESVDKIEVLYEDETFRSREFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVTDDSEYVETIIAKCIDHYTKLRVENAELPE
DEEKKTIDPRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDIFEKTILESNDVGGLLAY
SLKICMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE
DNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIPAVPGSTNTGTVPTPEKDSDAMET
EDKVGSSPAGKADLQKDEPKDQNSKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDA
VRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEA
LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGAL
GLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLGLGLVMLGSKSAQAIEDMVGYAQET
QHEKILRGLAVGIAMVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAI
RRLLHVAVSDVNDDVRRAAVESIGFILFRTPDQCPSVVSLLSESYNPHVRCGAAMALGIC
CAGTGLKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEVTCPKVAQFRQLYSKVIND
KHDDVMAKFGAILAQGILDAGGRNMSISLQSRTGHTHMPSVVGLLVFTQFWFWFPLSHFL
SLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPALEVPKEKEKEKVSTAVLSITAKA
KKKEKEKEKKEEEKMEVETDGDKEKKDEEKEKEKEKKKEPEPNFQLLENPARVMPAQLKV
LAMPETCRYQPFKPLHTGGIIILKDTSEEEEELVEPVSAHGPKIEEEEQEPEAPEPFEYI
DE
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctctgccgctggaatcatatccctcctggatgaggacgagccgaagctgaag
gaatttgctcttcataaactgaatgccattgtcaatgacttctgggctgagatctcagaa
tctgttgataagattgaggttttgtatgaagatgagacattccggagtagggagtttgca
gctcttgttgcttccaaagttttttatcatcttggagcctttgaagaatccctgaactac
gcccttggtgctggtgaccttttcaatgtgacagatgattcggaatatgtcgagaccatt
attgctaaatgcattgatcactataccaaattgcgtgtggaaaatgctgagctgccagag
gatgaggagaagaagaccattgatccccgtttggagggcattgttaataagatgttccag
aggtgcctggatgaccacaagtacaagcaggccattggcattgctctggagacacggcgc
ttggacatcttcgagaaaaccatcttggaatcgaatgatgtagggggactccttgcctac
agtctaaagatctgcatgtcactgatgcagaataagaaattccggaatgaggtcctcaga
gttcttgtgaaactctacatgaacctggagaagcctgactttatcaatgtctgccagtgc
ttgattttcctggatgacccacaagcagtgagtgacatcctggagaagctagtgaaggag
gacaacctgctgatggcctaccagatctgctttgatctgtatgagagcgccagccaacag
ttcctctcgtcagtcattcagaacctgcgcacagttggcacgccaatccctgctgtgcct
ggctccaccaacacgggcaccgtgcccacaccagaaaaggatagtgatgccatggagact
gaagacaaagttggaagctcacctgcgggaaaggctgacttgcagaaagatgaaccaaaa
gaccagaactccaaaatgattaagatactgagcggagaaatggcaatcgaattgcatctc
cagttccttattcgaaataacaatacggacttgatgattctgaaaaatacaaaggatgct
gttcgaaattcagtgtgtcacacagcaacggtcatagccaactccttcatgcatacagga
accacaagtgaccagtttctaagagagaatttggagtggctcgcaagggcgaccaactgg
gccaaatttacagccacagccagccttggtgtcatccacaagggccatgaaaaagaagca
ttgcagttgatggccacatacctgcccaaggacacctcgcctggctcggcctatcaggaa
ggtggtggtttgtacgccttgggtctcatccatgccaaccatggaggggacatcattgac
tatctcctcagtcagctcaagaatgccagcaacgatattgtgcgccatggtggtgccctg
ggccttggcttagcagcccttggcacagcacgacaggatgtttatgatcttctgaagtca
aacctgtatcaagatgacgcagttacaggagaggctgctggtctgggtctgggcttggtg
atgctgggctcgaagtcggcccaggctatcgaggacatggtaggctacgcccaggagacc
cagcacgagaagattctgcgcgggctggccgtgggcatcgccatggtcatgtacggcagg
atggaggaagctgacgcgctcatcgaaagcctctgcagagacaaggaccccatcctgaga
cgctcgggaatgtacacagtggccatggcctactgcggctccgggaacaacaaggccatc
cgacgcctgctccacgtggctgtcagtgacgtaaatgatgatgtgaggagagcagcggtt
gagtccattggcttcatcttgtttaggactccagatcagtgccccagcgtggtgtccttg
ctgtcggagagctacaaccctcatgtgcgctgcggagcggccatggccctggggatctgc
tgtgctggcacaggactcaaggaagccataaaccttctggagcccatgaccaacgacccc
gtgaattacgtcagacagggagccctcatcgcctctgccctcatcatgattcaacagacc
gaggtcacttgtccgaaggtcgctcagttcaggcagctgtactccaaggtcatcaacgac
aaacacgacgacgtgatggccaagttcggggccatcttggcccagggcatcctggatgca
ggtggccgtaacatgtccatctcgctgcagtcacgcacaggtcacacacacatgccatct
gtggtggggctgctggtcttcactcagttctggttctggttcccgctctcccacttcctg
tcgctggccttcacccccaccgccatcatcggcctcaacaaggacctgaagatgcccaag
gtgcagtacaggtccaactgcaagccctccacattcgcctacccacccgcgctggaggtg
cccaaggagaaagagaaggagaaggtctccaccgctgttctctccatcaccgccaaggcc
aagaagaaggagaaggaaaaggagaagaaggaggaggagaagatggaagtggagacggat
ggagacaaagaaaagaaggatgaggagaaggagaaagagaaagagaagaagaaggagccc
gagcccaacttccagctgctggagaacccggcccgagtgatgccggcccagctcaaagtg
ctggccatgcccgagacctgccgctaccagcccttcaagcctttgcacacgggcggcatc
atcatcctgaaagacaccagtgaggaagaggaggagctagtggagcccgtctctgcccac
ggccccaagatcgaggaggaagagcaggagcccgaggcccccgagccctttgagtacatc
gacgagtga
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