Aggregatimonas sangjinii: FGM00_02720
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Entry
FGM00_02720 CDS
T07837
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
asag
Aggregatimonas sangjinii
Pathway
asag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGM00_02720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asag03019
]
FGM00_02720
03016 Transfer RNA biogenesis [BR:
asag03016
]
FGM00_02720
Enzymes [BR:
asag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FGM00_02720
Messenger RNA biogenesis [BR:
asag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FGM00_02720
Transfer RNA biogenesis [BR:
asag03016
]
Prokaryotic type
tRNA degradation factors
FGM00_02720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QCW99081
UniProt:
A0A5B7SLY4
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All DBs
Position
complement(667908..670133)
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AA seq
741 aa
AA seq
DB search
MIPKVFREVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYEQKDLPFLPL
TVDYREKFAASGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYSAETQVMIQLMS
NDEDVMPDAMAGLAASAAIQLSDFPFECAISEARVGRINGEFIINPSRTQLEESDLDMII
GASADSVMMVEGEMDEISEEEMVEAIKFAHEAIKKQIDAQLRLAEAFGRKEVREYEQGTE
DEDLEKKIREMAYDKVYAVAKAGSAKHERSEAFSAIKDEIKATYSEEELEEKGDLISEYY
RKAEKAAVRDLTLNEGMRLDGRKTDEIRPIWCEVDYLPSTHGSSIFTRGETQALATVTLG
TSREANKIDMPSYEGEETFYLHYNFPPFCTGEARPIRGTSRREVGHGNLAQRALKGMIPE
DCPYTVRVVSEVLESNGSSSMATVCSGTMALMDAGVQLKKPVSGIAMGLISDADSGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVKALKQARDGRLHILTKL
TDTIAAPNADVKPHAPRMVTRVIPNEFIGALIGPGGKVIQELQKETDTTIVINEDPVTEE
GIVEILGTSEDGIQAVLAKIDSLMFKPEVGSVYEVKVIKMLDFGAVVEYQDAPGNETLLH
VSELAWERTENVSDVVNMGDVFDIKYIGIDPRTRKDKVSRKALLPKPEGYVERPPRSNDR
GRGRDDRRGGRDNRDRKPRRD
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtatttagagaggtcatcgaccttggtgacggtagggaaatttctatc
gagaccggtaaattggcgaagcaggcccacggttctgtggtcgttcaatccggaaaatgt
atgctactgtgtacggtagtgtcgaattacgaacaaaaagatttgccttttctaccgtta
acggtcgattatcgcgaaaagtttgcggcctccggtcgttatcctggtgggtttttcaaa
agagaagctcgacccagcgatggagaagtattgaccatgcgtctggtagaccgtgttttg
cgcccccttttcccaaaggattatagcgccgagacccaggtcatgatacagctaatgtcg
aatgacgaagatgtcatgccggatgcaatggcgggattggcggcatctgcggccattcag
ctttctgattttccgtttgaatgtgccatttccgaggcgcgagttggccggatcaacggt
gagttcatcatcaacccaagccgtacgcagctagaggaaagtgatctcgatatgattatc
ggtgcatctgccgactccgtgatgatggtagaaggagaaatggacgagatttccgaagag
gaaatggtcgaagccatcaagttcgcccatgaagccatcaaaaagcaaatcgacgcccaa
ttacgattagccgaggctttcggaagaaaggaagtacgcgaatacgagcaaggtaccgaa
gacgaagatctggagaagaaaatccgcgaaatggcttacgataaagtgtacgccgtagcg
aaagctggttctgccaagcacgagcgcagtgaggcattttcggcaattaaagatgagatc
aaagcgacctattccgaggaagaattagaggaaaaaggcgatttgatttccgaatactac
cgcaaagccgagaaagcggccgtacgggatttgaccttgaatgaaggtatgcgtctagac
ggaagaaaaaccgatgaaatccgtccgatttggtgcgaggttgattacctgccatcaaca
cacggttcttcaatatttaccagaggggaaacgcaggccttggctacggtaaccttaggt
acctcgcgagaagcgaacaaaatagacatgccctcctatgaaggcgaggaaacattttac
ctgcactataacttcccgccattctgtacgggtgaagcacggcccattcgtggtacttca
cgaagggaggtaggtcatggcaacttggcgcaacgcgctttaaaaggaatgatcccggaa
gattgcccctatacggttcgtgtagtttcggaagtattggaatctaacggttcttcttcc
atggcaacggtatgttccggtacgatggccttgatggatgcgggtgtacaacttaaaaaa
ccggtatccggtatcgctatgggattgatttccgatgccgattcaggaaagtatgccgtg
ctctcggatatccttggtgatgaagatcacttgggcgatatggactttaaagtaaccggt
actgcagatggtatcaccgcttgccagatggatattaaggtaaaaggattgtcctacgag
attcttgtaaaggcgttgaagcaggcaagggacggtcgtttacacattctcaccaaatta
accgataccatcgccgcgcctaatgcagacgtgaagccgcacgcgccacgaatggttact
cgtgtcattccgaacgaattcatcggtgccttgatcggtcctggtggaaaagtgatccag
gaacttcagaaagaaaccgatacgactatcgtgattaacgaagaccctgttaccgaagag
ggtattgtagagattttgggaacatcggaagatggaatccaagctgttctcgcaaaaatc
gattcgctgatgttcaaacccgaagtgggtagcgtttacgaggtaaaagtcattaagatg
ctagattttggcgccgtagtcgaataccaggatgctcctggcaacgaaacacttcttcat
gtatcggaattggcgtgggagcgtaccgaaaacgtttcagacgtagtgaatatgggcgat
gttttcgatatcaaatacatcggtatcgacccacgtacccgtaaagacaaggtatcgcgc
aaagcgttattgccaaaaccggaaggatatgtcgaaagaccgccacgtagcaatgatcgt
ggtcgtggccgtgatgatcgcagaggcggacgcgataacagagatcgtaaacctagaagg
gattaa
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