Aggregatimonas sangjinii: FGM00_03580
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Entry
FGM00_03580 CDS
T07837
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
asag
Aggregatimonas sangjinii
Pathway
asag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FGM00_03580 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asag03021
]
FGM00_03580 (rpoC)
03400 DNA repair and recombination proteins [BR:
asag03400
]
FGM00_03580 (rpoC)
Enzymes [BR:
asag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FGM00_03580 (rpoC)
Transcription machinery [BR:
asag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FGM00_03580 (rpoC)
DNA repair and recombination proteins [BR:
asag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FGM00_03580 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QCW99237
UniProt:
A0A5B7SQG1
LinkDB
All DBs
Position
837786..842084
Genome browser
AA seq
1432 aa
AA seq
DB search
MARIHDNTPQKRFNKISIGLASPEAILAESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYRGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKI
GYLLGLPSKKLDMIIYYERYVVIQPGIAKGPEGEEINKMDFLTEEEYLNILEEIPPENQY
LEDTDPNKFIAKMGAECLIDLLGRIDLKQLSYDLRHKANTETSKQRKTEALKRLQVVEAL
RESQQNRENKPEWMIMKVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLV
EIKAPEVILRNEKRMLQESVDSLFDNTRKASAVKTESNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPEMKLYECGLPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIRLHPLVCTAFNADFDG
DQMAVHLPLGPEAILEAQLLMLASHNILNPANGSPITVPSQDMVLGLYYMTKERKSTKEV
PVKGEGLTFYSDEEVVIAFNEGMLELNAGIKVRTKDFNEEGELVNQIVQTTVGRVLFNQV
VPEAAGYVNDVLNKKSLRDIIGNILAVTDVPTTAEFLDKIKTMGYEFAFKGGLSFSLGDI
IIPKEKHEMIADANGQVDGIMTNYNMGLITNNERYNQVIDVWTSTNALLTELAMKRIRED
QQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSTAGGGEIIENPILSNFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVNIEDCETLRGVTVEALRKNE
EIVESLGARILGRVSLHDVYNPLTEELLLTAGQEIMESDVKRISDSPIEKVEVRSALTCE
APKGICAQCYGRNLSTNKMVQRGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEDSK
LEAKFAGVAEIEDLRTVKGEDSDGNNAEIVISRTSEIKVIDAKTGIVLSTNNIPYGSQLF
IKNGAKVAKDELICQWDPYNGVIVSEFPGKIAYENIEQGVTYQVEIDEQTGFQEKVISES
RNKKLIPTLLIMNNKDEVLRSYNLPVGSHIMVDDGDKIKEGKTLVKIPRKSAKAGDITGG
LPRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIIESKLGEIKKYLVKLSNQILV
QENDYVRAGMPLSDGSITPEDILKIKGPSAVQQYLVNEVQEVYRLQGVKINDKHFEVVVR
QMMRKVRIVDPGDTIFLENQLVHKDDFINENDDIFGKKVVMDAGESENLKAGMIITPREL
RDENSILKRGDKAVVEARDAVSATATPILQGITRASLQTKSFISAASFQETTKVLNEAAV
SGKVDTLEGLKENVIVGHRIPAGTGMRDYENIIVGSKEEYDEIMARKEALKF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggctagaatacacgataatacaccacaaaaaaggtttaacaagatttcgatcggcttg
gcttccccggaagctattttggcagagtcaagaggcgaggtcttaaaacctgaaactatt
aactatagaacccacaagcctgagcgtgacggacttttctgtgagcgtatctttggtcct
gtcaaggattatgagtgtgcctgtggaaagtataagcgtattcgttaccgcggtatcgtt
tgtgaccgttgtggcgttgaagttaccgagaagaaagtacgtagggatcgcgtagggcat
atcaatttggtagttcctgtggcgcatatctggtacttccgttcgctaccgaacaaaatc
ggttaccttctggggcttccttccaagaagctcgatatgatcatctactatgaacgctat
gtagtcatacaacccggtatcgccaaaggacctgaaggggaagaaatcaataagatggat
ttccttacggaagaagagtacttgaatatcttggaggagattccgccggaaaatcaatac
ttagaagacaccgatcccaataaattcatcgcaaagatgggtgcggaatgtttgatcgat
cttttgggaagaatcgatttgaaacaactgtcgtatgatttaaggcacaaggcgaatacc
gaaacttcaaaacaacgtaagacggaagccctaaaaaggcttcaagttgtagaggcactt
cgagaatcccagcaaaatagggagaacaagccggaatggatgattatgaaggtggttccc
gttattccgccggaattacgtccgttggtaccgttggatggtggtcgttttgcgacctcc
gatttaaatgatctgtaccgaagggtaattatacgaaacaaccgtttaaagcgattggtc
gaaatcaaggcacccgaggttattctgagaaatgagaagcgtatgcttcaagaatctgtt
gattcgctcttcgataacactcgaaaagcatctgcggtaaaaacagaatctaacaggcct
ttaaaatccctttccgattcattgaagggaaaacaaggtcgtttccgtcagaacctgtta
ggaaagcgtgtcgattattccgctcgttcggtaatcgtcgttggtcctgaaatgaagctg
tatgaatgcggtcttccaaaggatatggctgccgaattatacaaaccattcgtgattcga
aagttgatcgaacgaggtatcgtaaaaacggtaaaatcggcaaagaaaataatagacaaa
aaagaacccgtagtttgggatattcttgaaaacgtattgaaaggacacccggtactattg
aacagggccccgacattacaccgattaggtattcaagcattccaacccaaacttatcgaa
gggaaggcaattcgtttgcacccgttggtttgtacggcttttaatgcggattttgatggt
gaccagatggcggtgcaccttccattgggcccagaggccattttggaagcacagctgctt
atgttggcatcgcacaatatattgaaccctgctaatggttctccgattaccgtgccctcc
caggatatggtcttgggtctgtattatatgaccaaagagcgtaaatctacaaaggaggta
cctgtaaagggcgaaggtttgactttctactccgatgaggaggtggttattgccttcaat
gaaggaatgttggagctgaatgctggtattaaagtgcgaacgaaggactttaacgaagag
ggagaattggttaatcaaattgttcagactactgttggtagggtactgttcaatcaagta
gtgccggaagctgccggttacgtgaatgatgtattgaacaaaaaatcattgcgtgatatt
atcggtaatattcttgcggtgaccgatgtgcctaccacagccgaattcttggataagata
aagacaatggggtacgaattcgcttttaaaggtggattgtcctttagtcttggcgatatt
atcattcctaaggagaaacacgagatgattgccgatgccaacggtcaagttgatggtatt
atgaccaattacaacatgggtctgattaccaataatgaaagatacaatcaggttattgat
gtatggacatcaacaaacgcgctattgactgaattggcgatgaaacgtattcgcgaagac
caacaaggtttcaactcggtgtatatgatgttggattctggtgcgaggggctcgaaagag
cagattcgccagttgaccggtatgcgtggactgatggccaagcctaaaaagtctactgct
ggaggtggtgagattatcgagaacccgattctctccaactttaaggagggcctatcgatt
ttggaatactttatctctacccacggtgcacgtaaaggtctcgccgataccgctttgaaa
acggccgatgccggatatctaacacgtcgtttggtggatgtttctcaagatgtaatcgtt
aatatcgaggattgtgaaacccttagaggtgtcacggtcgaagcattgcgtaaaaacgaa
gaaatcgttgaatctttgggggcccgtattctaggtagggtttccttacatgacgtatac
aatccgttgactgaggaattgttgctgactgcaggtcaggaaatcatggagtcggatgta
aaacgcatatcggattccccaattgaaaaggtagaagtgcgttcagcattgacgtgtgag
gcaccaaaaggtatttgtgcccaatgttatggtcgaaacctttccaccaataagatggtg
caaagaggtgaagctgttggtgttgtcgctgcacaatccattggagagccaggaacacag
ttaacgttgcgtacgttccacgttgggggtattgctggaaacatttccgaagacagtaag
ttggaagccaagttcgccggtgttgccgaaatcgaggatctacgaaccgtaaaaggagag
gattctgatggtaataacgccgaaatcgttatttcccgaacttccgaaattaaagtgatc
gatgccaaaaccggcattgtgctaagtacgaacaatattccttatggttcgcaattgttc
attaagaacggggccaaagtagccaaggatgagttgatttgtcagtgggatccatataac
ggtgtaatcgtttcggagtttccaggtaaaatagcgtacgagaatatcgaacaaggtgtt
acctatcaagtagaaatcgatgaacaaaccggattccaggagaaagtaatctccgaatcc
cgtaacaagaaattgatacctacgctcttgattatgaataacaaggatgaagtgttgcgt
tcgtacaaccttccggtcggttcccacattatggtcgatgacggagataagatcaaggaa
ggtaaaactttggtgaaaataccacgtaaatcggcgaaagcaggtgatattacgggtggt
cttccaagggttaccgaattgttcgaagcgcgaaatccatctaacccggctgtggtgtct
gaaatcgatggcgtagtttcttttggaaaaataaaaaggggtaaccgcgaaatcatcatt
gagtccaaattaggtgaaatcaagaagtaccttgtaaaactctcaaaccagattttggtg
caggagaacgattacgtaagggcaggcatgcctttgtcggatggttccattacacctgaa
gacatcttgaaaatcaaaggtccatctgctgttcaacagtatttggtgaacgaggttcag
gaagtatatcgtttgcaaggggtgaaaatcaacgacaaacattttgaggtagtcgttcga
cagatgatgcgtaaagtacggattgtggatccaggagatactattttcttggagaatcaa
ctagtgcataaagatgatttcatcaatgagaacgacgatatcttcggtaagaaagtagtg
atggacgccggggaatccgagaatttgaaggcaggtatgatcattacccctagggaacta
agggatgagaattccatcctcaagcgcggtgacaaagctgtggtagaagcaagggatgcc
gtttcggcaaccgcaactcctatcttacaaggtatcacgagagcctcgctacaaacgaaa
tcgtttatttctgccgcatcgttccaagagaccactaaagtattgaacgaagctgcggta
agcggtaaggtagataccttggaaggcttgaaggaaaatgttatcgtagggcacagaatt
cctgctggtacaggtatgcgtgactatgagaatattatcgtcggttcaaaagaggaatac
gatgaaataatggcgcgtaaagaggcgttaaaattctaa
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integrated database retrieval system
