Aggregatimonas sangjinii: FGM00_06210
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Entry
FGM00_06210 CDS
T07837
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asag
Aggregatimonas sangjinii
Pathway
asag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGM00_06210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asag03019
]
FGM00_06210
03400 DNA repair and recombination proteins [BR:
asag03400
]
FGM00_06210
Enzymes [BR:
asag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGM00_06210
Messenger RNA biogenesis [BR:
asag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FGM00_06210
DNA repair and recombination proteins [BR:
asag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FGM00_06210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QCW99711
UniProt:
A0A5B7SNJ4
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All DBs
Position
complement(1549058..1550953)
Genome browser
AA seq
631 aa
AA seq
DB search
MHTPKHILNTYWGHSEFRGSQEEVITAILENKDVLALMPTGGGKSVCFQVPALVMEGICI
VVSPLVALIQNQVNSLRNKGIKAIALTGGIPQNEIIDLLDNCCFGNYKFLYLSPERLKQE
LVQERIQQMPVNLIAIDEAHCISQWGHDFRPAYLECAKLRKLAPESPIIALTATATQTVA
DDIIESLLFSEPLVVKDSFARKNIAFGVLWADDKKYRLRSWCAKIQNSAIVYVSTRRAAQ
ELCSYLVGQGISTTFFHGGISKEDKQKRLDLWLRNTVKVMVATNAFGMGIDKPDVELIVH
YQIPDCIENYFQEAGRAGRNGASAKAILLTNKTDEQQVKNQFLSVLPDTAFIKMVYNKLN
NYFQISYGELPETEFLLNFNAFCETYKLNTLLAFNAFRILDQYSVISLNESFFKKTIVQV
LVGKQQLFEYLEKNQGLVPIVQTILRTYGGVFDFLTKINPFLIAKKAETNEARVTRVLEQ
LQKDAIIDYDAQESDLSLVFLVPREDDITINSFAKKVQERHRLKETQIDSMLAYVKNDQQ
CRNKQLLHYFEEEVRINCGICDVCRRISVKAETNSEAIMNDIIKLLNFKNSGSRSLIASL
NYEENLVLEGIKMLLEDRRIKINSRNEYEIV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
gtgcacacacccaaacacatattaaatacctattggggacatagtgaatttagaggttca
caggaggaggttattaccgctattttagaaaacaaagatgtgctcgccctcatgcccacg
ggaggtggcaagtcggtctgctttcaagttcccgccttggttatggagggtatctgtatc
gtagtctctcccctagtggcacttattcagaaccaagtgaattcgttgaggaacaaaggt
attaaagccattgcgcttacaggtggcattcctcaaaatgaaatcatcgacctattggat
aattgttgttttggaaattacaaatttttatacctctctcctgagcgcctcaaacaagaa
ttggtacaagagcgcattcagcaaatgcccgtcaaccttatagctatagatgaagcccat
tgcatttcgcaatgggggcatgattttagacctgcctatttagaatgtgcaaaattgaga
aagttggcacctgaaagccctataatcgccttaacggctacggccacccagaccgttgcc
gatgatattatcgaaagtcttctgttttcggagcctttggtcgtaaaggattcgttcgca
cgaaaaaatattgcatttggagttctctgggccgatgacaaaaaatacaggctacgaagc
tggtgtgccaaaattcaaaatagcgccatcgtctatgtgagcaccagacgtgcggcccaa
gagttatgttcttatctcgtcggtcaaggcatttcaactaccttttttcacggtggcatt
tctaaagaggataaacaaaaacggcttgacctttggttgaggaatactgtaaaagtgatg
gtggccaccaatgctttcggaatgggaatcgacaagccggatgtagaactgatagtacat
taccaaataccggattgtatcgaaaactattttcaagaggccgggcgggcgggtagaaac
ggagcgtctgccaaagcaatcctacttaccaataaaacagatgagcaacaggtaaaaaac
cagttcttgagtgtattgccggataccgctttcatcaaaatggtatacaataagctgaac
aactattttcaaatttcctatggggaacttcctgagaccgaattcttattgaatttcaac
gcattctgcgagacctataaattaaatacgttgctcgcttttaatgcctttcgcatattg
gatcagtattccgtcatttcgctcaacgaatcattcttcaaaaaaacgatagtacaggta
ctggtcggcaaacagcaacttttcgagtaccttgaaaagaatcaggggcttgttcccatc
gttcagaccatattgcgtacatacggcggcgtatttgattttttgaccaaaataaatcca
tttctaatcgcaaaaaaggccgaaacaaacgaagcaagggtaaccagggtactagagcag
cttcaaaaggatgccattatcgattatgacgctcaggaaagcgatctttccttggtattc
ctagtccccagggaggacgacatcactattaacagctttgccaaaaaagtacaggaaagg
caccggctaaaagagacacaaattgacagtatgttggcttacgtgaaaaacgaccaacaa
tgtagaaataagcaattgttacactattttgaagaggaagtacgcattaattgcggtatc
tgtgatgtatgtcgacgtatttcggttaaagccgaaacaaactcggaagccataatgaac
gatatcattaaacttttgaatttcaagaatagtggttcaagaagccttatcgctagttta
aactatgaggaaaacttggttttggaaggtataaagatgctacttgaagatcgaagaatc
aagatcaactcacgaaacgaatatgaaatagtatga
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