Aggregatimonas sangjinii: FGM00_07890
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Entry
FGM00_07890 CDS
T07837
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asag
Aggregatimonas sangjinii
Pathway
asag03420
Nucleotide excision repair
asag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FGM00_07890
03430 Mismatch repair
FGM00_07890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asag03400
]
FGM00_07890
Enzymes [BR:
asag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGM00_07890
DNA repair and recombination proteins [BR:
asag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FGM00_07890
MMR (mismatch excision repair)
Other MMR factors
FGM00_07890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QCX00024
UniProt:
A0A5B7STJ8
LinkDB
All DBs
Position
complement(1921371..1923701)
Genome browser
AA seq
776 aa
AA seq
DB search
MENFIDQLNDAQKAPVLHKDGPLMVIAGAGSGKTRVLTYRIAHLMAQGVDSFNILALTFT
NKAAREMKKRIAEIVGSSEAKNLWMGTFHSVFAKLLRFDGDKLGFPSNYTIYDTQDSQRL
ISAIIKEMGLDKDIYKYKQVQNRISSYKNSLITVKAYFNNPELVEADAMAKRPRMGDIYQ
NYVDRCFKAGAMDFDDLLLRTNELLNRFPEVLMKYQDRFRYILVDEYQDTNHSQYLIVKA
LADRYHNICVVGDDAQSIYSFRGANISNILNFQRDYENVGMYRLEQNYRSTKNIVNAANS
IIAKNKNQLEKVVWTANDEGALIKIHRSTTDAEEGRYVAGSIWEHRMQEQLPNGNFAVLY
RTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVLSYLRLVINPKDEEALKRVINFP
GRGIGQTTVDKLVVAANHYGRSIFEVIENLDKINLKINSGTKNKLRDFATMIQSFQIMNE
GVDAFVLAEHVAKKTGILLEFKKDGTPEGIARMENIEELLNGIKDFVEGQKELADATGNI
SEFLEDVALATDLDKDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQNRYRWGKLIDAEPSRFLEEIDEQYVENLTPIDNAS
YRYKPLVDSDIFGEVDKSKLRQVKPKQGTPPSIGKPNENQLRKLRKLKPQLAQPVGNTNV
IDPSLAEGTVVNHTRFGRGKVLKIEGIGNDKKAEIQFEQGNVKKLLLRFAKLEVVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaatttcattgaccagttgaatgatgcccaaaaggcacctgttttacataaggat
ggccctttgatggtcattgccggtgccggatcaggtaagacacgtgttcttacgtaccgt
atcgcacatttgatggcacaaggcgtagattctttcaatatactggcattgacctttacc
aataaggcggcacgcgagatgaaaaagcgtattgccgaaattgtcggttcttccgaggca
aaaaatctttggatggggacatttcattccgtctttgcaaagctgcttcgatttgatggg
gacaaactcggatttccgagcaattatacgatttatgatacccaggattcccaacgtttg
atatccgctatcatcaaagaaatgggattggataaggatatttacaaatacaagcaagta
cagaatcgaatatcatcctacaagaatagcctgattacggtaaaggcctacttcaataat
cccgagttggtggaagcagatgccatggcgaaacgtccccggatgggagatatctaccaa
aattatgtagatcgctgttttaaggccggcgcgatggatttcgatgacctgctgttgcgc
accaacgagcttttaaaccgctttccagaggtattgatgaagtatcaagaccgatttcgg
tacattttggtcgatgagtaccaagataccaatcattcgcaataccttatcgtaaaggcc
ctggccgatcgttaccacaatatttgcgtggtaggtgatgatgcccaaagtatctattcg
ttcaggggggccaatatcagtaatatcctcaactttcaaagggactacgaaaatgtgggg
atgtaccgtttggaacagaattatcgttctacgaagaatatcgttaatgcggcgaattcc
atcattgccaaaaacaagaaccagcttgaaaaagtggtatggacggccaatgatgaaggt
gcgttgatcaaaatacaccgcagtacgaccgatgccgaagaagggcgttacgttgcaggg
tccatatgggaacaccgaatgcaagagcaactgcccaacggtaactttgcggtactgtac
cgcaccaactcacagtctcgcgctattgaagacgccttgcgtaagcgcgacattccctat
cgtatttacgggggcttgtcgttctaccaaagaaaggaaataaaggacgtactgtcgtat
ttgcgacttgtaatcaacccaaaggatgaggaagcgttaaagcgtgtcatcaattttccc
ggccgcggcatcggacaaacgacggtagataaattggtcgttgccgccaaccattacggc
cgctctattttcgaggtgattgaaaacctggacaaaatcaatttaaagatcaattccggc
accaaaaataaacttcgcgatttcgcgacaatgatccaaagttttcaaatcatgaatgaa
ggggtcgatgcctttgtgctggcagagcatgtagccaaaaagaccggtattcttttagag
tttaaaaaggatggtactccggagggcatcgcccgaatggaaaacatagaggagctactt
aacggaatcaaagattttgttgaaggccaaaaagaattggccgatgccaccggaaacatt
agtgaatttttagaggatgtggccctagccaccgacttggataaggatacaggggacgat
gaccgtgttgctctgatgaccattcacttggcaaaaggcctggaattcccctacgtgtac
atcgtgggtatggaggaagatttgtttccatctgcgatgagcatgaatacccgaagcgag
cttgaagaggagcgacgcttgttttatgtggctttgaccagagcagaaaaacaggcctat
ttgacctatacgcaaaaccgttaccgctggggaaaactgatcgatgcggagccaagtcgc
tttttggaggagatagacgagcagtacgtcgagaacctaacaccaatagacaatgcatct
taccgttacaaacctttggtagactccgatattttcggtgaggtagataagagcaaattg
cgacaggtaaaacccaaacagggaacgcccccaagtatcggtaagcctaatgaaaaccag
cttagaaaacttcgtaaactaaaacctcaactagcgcaaccagttggcaataccaatgtt
atcgacccaagtcttgcagagggtacggtcgtgaaccatacccgttttggtaggggcaaa
gtcttaaaaatcgaggggataggtaatgataaaaaggccgagatacaattcgaacagggc
aatgtaaagaaactgctgctgcgatttgctaagttggaagtagtcgaataa
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