Aggregatimonas sangjinii: FGM00_08130
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Entry
FGM00_08130 CDS
T07837
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
asag
Aggregatimonas sangjinii
Pathway
asag02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asag00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FGM00_08130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asag03021
]
FGM00_08130
Transcription machinery [BR:
asag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FGM00_08130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QCX00072
UniProt:
A0A5B7SPG7
LinkDB
All DBs
Position
1984330..1985193
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AA seq
287 aa
AA seq
DB search
MRQLKIIKQVTNRESKSLDKYLQDISKIDLITASEEVELAQKIRDGDQAALEKLTTANLR
FVVSVAKQYQNQGLTLPDLINEGNVGLVKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRVVRLPLNKIGSINKIKKTFSYLEQAHERPPSAEEIAKELEMTVNEVRQSLKNSGRHV
SMDAPLREGEDSNLYDVLRSGESPRPDNTLMQQSLNTEINRALETLSPREADVVKLYYGI
GDQQSMTLAEIGLTFDLTRERVRQIREKAIRKLRHNSRSKMLKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaactaaagattatcaagcaggtaacgaacagggaatcgaaatcactggacaag
tatttgcaagatatcagtaaaattgacttgataacggctagtgaagaagtcgagttagca
caaaaaataagggatggggatcaagcggcccttgaaaaattaactactgccaatttacgt
ttcgtagtatcggtggccaaacaatatcaaaaccagggattaacacttcccgatttaata
aacgaaggaaacgttggacttgtaaaggccgcaaagcgttttgacgagacccgtggattc
aaatttatttcctatgccgtatggtggattcgccaatcgattcttcaggccttggccgag
caatcgcgcgttgtgcgtttgcctttgaacaaaattggctcgatcaataaaatcaaaaag
actttttcatatttagagcaggctcatgagcgtccgccatctgccgaggaaatcgccaaa
gaattggagatgaccgtgaacgaggtacgccaatcacttaaaaactcgggccgacacgta
tctatggatgcaccgcttcgcgagggcgaagattcaaatttatacgatgtactgcgttct
ggagagtcgccgagaccggacaatacgctcatgcaacagtccctgaacacggaaatcaat
agagccttggagactttatctcctcgcgaggccgacgtggttaaactatattatggcatt
ggcgatcaacagtccatgactttggccgaaatcggactcactttcgatttgacaagggag
cgcgtgcgccaaatacgggagaaagcaattcgtaagctgcgccataattctagaagtaaa
atgttgaaaacctatcttggatag
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