Aggregatimonas sangjinii: FGM00_10880
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Entry
FGM00_10880 CDS
T07837
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asag
Aggregatimonas sangjinii
Pathway
asag03420
Nucleotide excision repair
asag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FGM00_10880
03430 Mismatch repair
FGM00_10880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asag03400
]
FGM00_10880
Enzymes [BR:
asag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGM00_10880
DNA repair and recombination proteins [BR:
asag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FGM00_10880
MMR (mismatch excision repair)
Other MMR factors
FGM00_10880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QCX00585
UniProt:
A0A5B7SPJ0
LinkDB
All DBs
Position
complement(2617342..2619399)
Genome browser
AA seq
685 aa
AA seq
DB search
MNTPDTLNDGQKKAVEFYGRHLLVLAGAGTGKTKTIIARAAYLIETGIDPSKIQILTFTK
KAANEIVERVKATLPKSDGNSLSGATFHSWCNQLIVRFPNLFGAATYTVIDPDDQLSIMK
MVCGNQNLDFGKLRIKPQQLIDIYSLARNTKKSLTESLRVKLFKNKKDADTDYEISTIKP
HVENILRAYQQKKGEQRYLDYDDLLLVVSTQLRTNPEARDILSQHLDYLLVDEMQDTNPL
QWELLDPFVNICKLFCVGDDAQSIYSFRGADFRNVHLFKERVPESEVYKLEKNYRSTQEI
LDISNWLLEKSPIDYNKKLQSIRGKGELPQLVNVSDEWQEANWVADEILKNFTDEDRTFS
DHLILARSQYYSKSLQAVFIRRKIPYVTYGGRKFMQAAHIKDLVSLLRIVNNPYDEIAWI
RFLTFQEGVGEVRASRILQQVIENVEEGDIPKILQNAMPGEDGSKIAKLYESIKMENDVG
QMVDTAYEAMSLGLAFRYRRDWNEKRKGDFPVLKLLAKSYPTLGEFIGEGLLDNSENMNG
VNVLSESKLNTDENKDHVILSTIHSAKGLEADVCIILNVSPKAFPSAWSLDNLDEIEEDR
RVLYVALTRAKNRLIMTRNTASISAVHQSSIPNNKGERTDDADTYFLNELPENLVEQIVV
EHKFGKVKDASTPNKIDLSSGMDFS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaatactcccgatacacttaacgatggtcaaaagaaagcggtcgagttctatggccga
catttgttggttcttgccggggctggaaccggaaagaccaagaccattatcgctagggct
gcttatcttattgaaacgggaatagacccctcgaaaatacagatactcacctttactaaa
aaagccgccaatgaaattgtggaaagggtcaaagcaaccttgcccaaatcagatggaaat
tcattgagcggcgcaacttttcattcttggtgcaaccaattgattgtacgctttccgaat
cttttcggtgcggcgacttatacggtaattgaccctgatgaccagctgagtattatgaaa
atggtttgtgggaaccaaaatctagattttggcaaactacgtataaaaccgcagcagctt
atcgatatctattcgttggctcgaaatactaaaaagagcttaacagagagtcttcgagtt
aaactttttaagaataagaaggacgccgatactgactacgagatttccacgataaagcca
catgtcgagaatatactaagggcctatcaacaaaaaaaaggcgagcaacggtatttggat
tatgacgatctgcttttggtggtatcgacacagttgcgaaccaatcccgaggcgagggat
attctgtcgcaacaccttgactatctgctagtggatgagatgcaggacaccaatccgctg
caatgggagttgttagacccttttgtcaatatctgtaagttattttgcgttggtgatgac
gcgcagtccatctactcttttcgtggtgctgatttcaggaacgtgcacctttttaaagaa
cgagttcctgaatccgaggtttataaattggaaaaaaactatcgctccactcaagagatt
ttggatatatcgaattggctgctggaaaagtcaccgatagattacaataagaaattgcaa
tcgattcgaggtaaaggtgagttaccgcagcttgtaaatgttagtgacgaatggcaagaa
gccaattgggtcgcggatgaaatactgaaaaacttcacagatgaggatagaaccttttcg
gaccatttaattctggccaggtctcaatactattcgaagtcattacaggctgtctttatc
aggcgaaagattccctacgtaacctatggcggtcgaaaatttatgcaggcggcacacatt
aaagatttggtttctttgttacgcattgtgaacaacccctatgatgaaattgcatggatt
cgttttttaacgtttcaagaaggagttggcgaagttcgggcatcgcgaatccttcagcag
gtcattgaaaatgtagaggagggggacattccgaaaattcttcaaaatgctatgccaggg
gaagatggtagtaaaatagccaagttgtacgaatctattaaaatggaaaatgacgttggt
caaatggtcgataccgcatatgaggccatgtcgttaggtttggcatttcgatacagacga
gattggaatgaaaaaagaaaaggagattttcccgtattaaagctgcttgcaaaaagttat
cccacccttggggaatttataggggaaggattgcttgataattcagagaatatgaatggt
gttaatgtactaagtgagtctaagcttaatactgacgagaataaagaccatgttatccta
tctacgattcattcagcaaaaggactggaagcggatgtgtgcattatactcaatgtatca
cccaaagcctttccatctgcatggtcattggataatctggatgaaattgaagaagatagg
cgcgttctctacgttgctctaacacgtgcaaagaacaggttgataatgacccggaatact
gcttccatatctgccgtacatcaaagcagcataccgaataataaaggtgaaaggacagat
gatgcagacacttattttcttaacgaactgcctgagaacttagttgaacagatagtggtc
gaacacaaatttggaaaagtcaaagatgcttcaacaccgaataagattgacttgtcttct
ggaatggattttagctga
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