Aggregatimonas sangjinii: FGM00_11565
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Entry
FGM00_11565 CDS
T07837
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asag
Aggregatimonas sangjinii
Pathway
asag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGM00_11565 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asag03019
]
FGM00_11565 (recQ)
03400 DNA repair and recombination proteins [BR:
asag03400
]
FGM00_11565 (recQ)
Enzymes [BR:
asag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGM00_11565 (recQ)
Messenger RNA biogenesis [BR:
asag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FGM00_11565 (recQ)
DNA repair and recombination proteins [BR:
asag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FGM00_11565 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_40
HHH
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QCX00712
UniProt:
A0A5B7SR51
LinkDB
All DBs
Position
complement(2774780..2776993)
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AA seq
737 aa
AA seq
DB search
MTNDSTVSKQTDLHAQLKKFFGFSSFKGLQEEVVQHILDQKNAFVIMPTGGGKSLCYQLP
ALMQEGTAIIVSPLIALMKNQVDAIRGISSEHGIAHVLNSSLTKTEVKTVKEDIVSGVTK
LLYVAPESLTKPEYVEFLQSVKLSFMAVDEAHCISEWGHDFRPEYRNLRSIVDRLGKDIP
IIALTATATPKVQEDIVKNLGIPDAKLFKESFNRPNLFYEVRPKTVDVDTDIIRFVKKNA
GKSGIIYCLSRKRVQELAQVLQVNGVSAVPYHAGFDAKTRSRYQDMFLMQDVDVVVATIA
FGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGK
PVAEQEIGNALLQEVVAYAETSISRRKFILHYFGEVFDDVNGAGADMDDNVRNPKEKVEA
QDDVVKLIRVIQETSEKFKSKEVVKTLMGKVNAMLSSYKTNEKKVFGIGADKDKGYWMAL
IRQTLVAGLLNKEIEQYGVLHVTDKGKAFLKQPHSFMMTKDHVYGAAENDAIVSASRSGG
VSDEKLLKQLKDLRKKQADKLSVPPYVVFQDPSLEDMALKYPISMEELQNIHGVGEGKAR
KYGKPFVTFIADYVEENEIIRPEDLVVKTTGANSGLKLYIIQNVDRKLPLDDIASAKGLE
LPELIKEMEQIVFSGTKLNIAYWIDELFDEEQQEELHDYFIEAESDDIEVASAEFDGDYE
DEELRLYRLKFTSEVAH
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgatagtactgtttcgaagcagaccgatttacatgcacaactgaaaaaattc
tttggattctcgtcctttaaagggcttcaagaagaagttgtacagcatattttagaccag
aagaacgcttttgtgattatgcccactggcggtggcaaatcgctttgctaccagttacct
gcattaatgcaggaaggtaccgcgattatcgtttcaccacttatagcgcttatgaaaaat
caggtcgatgccattcgtggtatctcctcggaacacggtatagcccatgtattgaactct
tccttgacgaaaaccgaggtcaaaacggtgaaggaagacattgtatcgggagtaaccaaa
ttgctctacgtggcgcccgaatcactcaccaaaccagagtatgttgaatttctgcaatcg
gtaaaattatccttcatggccgttgatgaggcacattgcatctctgaatggggccatgat
tttagaccggaataccgcaatttaaggtcgatcgtcgaccgtttgggaaaagatatcccg
ataatcgctcttaccgcaacggctacgcctaaagttcaggaagacattgtgaagaatttg
gggattccggatgccaaactgttcaaagaatctttcaataggcctaatctgttttatgaa
gtacgtcccaaaacggttgacgtagatacggatatcattcggtttgtgaagaaaaatgca
ggcaaatcgggaattatctattgtcttagtcgaaaaagggttcaagagcttgctcaagta
cttcaagtgaacggtgttagtgcggttccctatcacgccggttttgacgcgaaaacgcgt
tcccggtatcaggatatgtttttgatgcaggatgttgatgtggtcgtggcgaccattgcc
tttggaatgggtatcgataaacctgacgtacgattcgtaatacaccacgacattcccaag
agtatcgaaagttactatcaggaaacgggcagggcaggacgcgacgggggcgagggccat
tgtttggccttttattcgtacaaggatattgaaaaacttgaaaaattcatgtccggtaag
cctgtggccgagcaggaaatcggaaacgcgctcttacaggaagtggttgcttatgccgaa
acgtcgatatcaagaagaaaattcattttacattatttcggtgaagtcttcgatgatgtg
aacggtgccggagccgatatggacgataatgtgcgaaaccctaaagaaaaagtggaagcc
caagatgacgtggtgaaactgataagggtcatacaggaaaccagcgaaaaattcaaatcg
aaagaggtcgtaaagacattgatgggtaaggtaaatgcaatgttgtcttcgtataagacc
aatgaaaagaaagtattcggaatcggtgcggacaaagacaaggggtattggatggccttg
atccgacagaccttggtcgccggactgttgaataaggaaatagaacagtatggcgtattg
catgttaccgataaagggaaggcttttctgaaacagccccattcgtttatgatgacgaaa
gaccatgtgtacggtgcggcggagaacgatgccatcgtcagtgcttcccgaagtggtggc
gttagtgacgaaaagttgttgaaacagttgaaagacctccgaaaaaaacaggccgataag
ctaagcgttcctccgtatgttgtttttcaagatccctccttggaggatatggcgttaaag
tatcctatttccatggaggaattacagaatattcacggggtaggtgaaggcaaggcgaga
aagtacggtaagcccttcgtgacatttattgcggactatgttgaagaaaacgagattatt
cgtccggaggatcttgtggtgaagaccaccggtgcgaattccggtttaaaattatatatc
atccaaaacgttgatcgaaagctaccactggatgatattgcctcggcgaaggggctcgag
ttgcccgaattgattaaggaaatggaacaaatcgttttcagcggcaccaaattgaatatc
gcctattggatagacgaactcttcgatgaagagcagcaggaagaattacacgattatttt
atcgaagcggaaagcgacgatattgaggtggcttcggctgaattcgacggggactacgaa
gatgaggaactacggttatacaggttgaagttcaccagcgaggtagcgcattaa
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